Arabidopsis thaliana (thale cress): AT1G50500
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Entry
AT1G50500 CDS
T00041
Symbol
HIT1
Name
(RefSeq) Membrane trafficking VPS53 family protein
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT1G50500 (HIT1)
Membrane trafficking [BR:
ath04131
]
Protein recycling
Others
EARP complex
AT1G50500 (HIT1)
Endosome - Golgi transport
Tethering complex
GARP complex
AT1G50500 (HIT1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
RINT1_TIP1
Rv0250c
XhlA
NPV_P10
DUF7201
MPH2
COG5_N
Motif
Other DBs
NCBI-GeneID:
841472
NCBI-ProteinID:
NP_001322424
TAIR:
AT1G50500
UniProt:
Q0WQF4
LinkDB
All DBs
Position
1:complement(18707924..18716118)
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AA seq
828 aa
AA seq
DB search
MDKSSALEYINQMFPTEASLTGVEPLMQKIQGEIRRVDASILSAVRQQSNSGTKAKEDLA
DATRAVEELSHKIQEIKSKAEQSEAMVQEICRDIKKLDFAKKNITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCNHFEAYRDVPKITELREKLNNIKQILKSHVFSD
FSSLGTGKETEETNLLQKLSDSCLVVDALEPSVREELVNNFCSRELTSYEQIFEGAELAK
LDKTERRYAWIKRRIRTNEEIWKIFPASWHVPYRLCIQFCKQTRKQVESILVNMKEKPVV
AILLLALQSTVEFEKELEKKFGGGVPTKDIEDDIEEIGTWEDNSQNISKIRKKYEKKFAA
SQETEENGFQQEKTGNKDLSVTGAGFNFRGMISSCFEPHLTPYIELEEKTLMDDLEKIVQ
EESWDVEDGSQNNVLSSSTQLFSNIKKSLKRCNTLSKNQTLFNLFKVFQRVLKAYATKLF
FKLPKGGTGIVAAATGMDGQIKVSERDERVICYIVNSAEYCHKTSGELAENVSEIIDPHY
ADGVDMSEVQDEFSAVITKALVTLVLGLETKFDTEMAVMTRVPWSTLESVGDQSGYVNGI
NTVLSGSIPVLGKLLTPVYFQFFLDKLASSLGPRFYANIFRCKQLSETGAQQMLLDTQAV
KSILLEIPSLARQTSTAASYSKFVSREMSRAEALLKVILSPIDSVADTYRALFPEGTPME
FQRILELKGLKKADQQSILDDFNKHGPGFTQQSVAAAMPQPMPTPPAPPLAITNPATAAG
FIANSEDVLTRAAALGRGAASTGFKKFIALTEAAKDRKDGPLRRLFNA
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggataagtcgagtgctttagagtatatcaaccagatgttcccaacagaggcatcgcta
actggcgttgagccacttatgcaaaagattcagggtgaaattcggcgggtcgatgctagc
atactctctgctgttcgtcaacagagtaattcgggaactaaagctaaagaagatcttgct
gatgctacgcgtgctgtggaggaactctctcataagattcaagagataaaatccaaagct
gagcaaagtgaagcaatggttcaagaaatatgccgtgacattaagaagttagattttgca
aagaagaacataaccacgacaatcactgcccttcaccgcctcacaatgttagtctctgct
gttgaacagcttcaggtgatggcgtcaaaaagacaatacaaggaggcagctgcacagctc
gaggctgtaaaccaattgtgtaaccactttgaagcatacagggatgttcctaaaatcacg
gagctcagagagaagcttaataatataaagcaaatccttaagtcccatgtattttctgat
ttttccagtttaggtactgggaaagagacagaggaaacaaatttgctacagaagttatct
gattcttgcttggttgttgatgctctggaaccatctgtgagggaagagttggtaaataac
ttttgcagcagggagctcacctcatatgaacaaatttttgaaggagctgaattggcaaag
ttggataagacagagcggagatatgcttggataaagcgtcgaatccgaacaaatgaagaa
atttggaagatttttcctgcttcttggcatgtgccgtataggctatgcattcagttctgc
aagcaaacaaggaagcaagtagaatctattctggtcaacatgaaagagaagccagttgta
gcgatattgcttctggcactacaaagtacagtggagtttgaaaaagaacttgaaaagaaa
tttggtggtggtgttcctactaaagatattgaagatgacattgaagaaattggtacatgg
gaagataatagtcagaatatatccaaaatccgcaagaaatatgaaaagaagtttgctgct
agtcaagaaaccgaggagaatggttttcaacaggaaaagaccggaaacaaagatttatct
gttactggagctgggtttaacttccgtggaatgatctcttcctgctttgaacctcattta
actccatatattgagttggaagagaaaacacttatggatgacctggagaaaattgttcag
gaggaatcatgggatgttgaggatggaagccaaaataatgttttatctagtagcacacag
ctattttccaatataaagaagagcttgaaacgctgtaatactctcagtaagaaccagact
ttattcaatttgttcaaggtctttcaacgagttttaaaggcctatgctacaaagctattt
tttaagctcccaaaaggaggcactggtatcgttgccgcagccacaggcatggatggacag
ataaaggtctcggagagagatgaaagggtgatatgctacatagttaattctgctgagtat
tgccacaaaacatctggtgaactggcagaaaacgtctcagaaattattgacccacattat
gctgatggtgtagacatgtcagaggtccaggatgaattttcagccgtcataacgaaagca
ttggtaacgctggtccttggacttgagactaaatttgacacagaaatggcagtgatgaca
cgtgttccatggagcacacttgagagtgttggtgaccagtctgggtacgtgaatggaata
aatacagtccttagcggcagcatacctgtcctcgggaaacttctaacaccagtttacttc
cagtttttccttgacaagctggcatcatccctaggaccacggttctatgctaatattttc
agatgcaagcaactatccgaaactggagctcaacagatgttactagatacgcaagctgtg
aagtcgattctactagaaattccttcccttgccagacagacctcaactgctgccagctat
tccaaatttgtgagccgtgaaatgagcagagctgaagcactccttaaggtcatactatcc
ccaatcgactcagtggcagacacttatcgtgcactgtttccggagggaacgcccatggag
tttcaacgcatcttagaacttaagggtcttaagaaagctgatcagcagagtatactagat
gatttcaacaagcatggtccaggattcacacagcagtcggttgcagcagcaatgccacaa
ccaatgccaaccccacctgcaccaccattggcaatcactaatccggctacagctgcaggg
ttcatagcaaacagcgaggatgttttaaccagagcagctgctcttggcagaggagctgca
agcactggcttcaagaagttcattgctcttaccgaagctgccaaagaccgcaaagatggg
cctttaaggagactcttcaacgcatga
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