Arabidopsis thaliana (thale cress): AT1G50510
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Entry
AT1G50510 CDS
T00041
Name
(RefSeq) indigoidine synthase A family protein
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00240
Pyrimidine metabolism
ath01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
AT1G50510
Enzymes [BR:
ath01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
AT1G50510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
DUF6750
Beta-AFase-like_GH127_cat
Motif
Other DBs
NCBI-GeneID:
841473
NCBI-ProteinID:
NP_564574
TAIR:
AT1G50510
UniProt:
Q84K35
A0A178WKH3
Structure
PDB
PDBj
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All DBs
Position
1:18716112..18719336
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AA seq
330 aa
AA seq
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MASSLAQSRISNLQNHLSPLEANNKLRSLVKISPQVSEALSNGRAVVALESTIISHGMPY
PQNLQTAKEVESIVRENGAIPATIAILNGVPCIGLSEEELERLASLGKSVQKTAGRDIAN
VVATRGNGATTVSATLFFASMVGIQVFVTGGIGGVHRHANHSMDISSDLTALGRTPIAVI
SAGVKSILDIPKTLEYLETQEVYVAAYKSDEFPAFFTEKSGCKAPSRVNSPEDCARVIDA
NMKLNRQAGILFAIPIPKHHSAAGNLIESATQRALTEAREQNVTGNAETPFLLARVNELT
GGTSLAANIALVKNNALIGSQIAVALSQLM
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctttagctcaatctagaatctcgaatctccagaatcatctttcacctctt
gaagcaaacaacaagctcaggagtctggtcaagatttctccccaagtatctgaagccttg
tctaatggacgtgctgttgtcgctcttgagtcaaccattatctcccatgggatgccttac
cctcaaaatctgcaaacagcaaaagaggtggagtcaattgtgagagaaaatggagcaatc
cctgcaacaattgctatccttaatggagtaccttgcataggtctgagcgaggaagaacta
gaacgtcttgcatctctcggaaaaagtgtccaaaagacagcgggaagggacatagcaaat
gttgtggctacaagaggaaacggtgcaactacagtctctgcaacgttgtttttcgcttca
atggttggcatccaagtttttgtgacgggcgggataggtggtgtccatagacatgccaac
cattcgatggacatatcatctgatcttactgcacttgggaggactccaatagcagtgata
tcagcaggcgttaaatcaatacttgatattccaaagactcttgaatatttggaaactcaa
gaagtgtatgttgctgcatacaagagcgatgagtttccagcatttttcacagaaaaaagt
ggctgtaaggcaccttcccgtgtaaatagccctgaagactgtgctagagtaatagatgca
aacatgaagctaaaccgtcaggcggggattctatttgccattccaattccgaaacaccat
tcagccgctggaaatcttatcgaatcagcaacacagcgtgctcttacagaagcaagggaa
caaaacgttactggaaatgcagaaactccattcttacttgcacgggtaaatgagttaacc
ggaggcacatcacttgcagcaaacattgcgcttgtgaaaaacaatgcccttatcggttct
cagattgcagtagccctttctcagctgatgtga
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