Arabidopsis thaliana (thale cress): AT1G50840
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Entry
AT1G50840 CDS
T00041
Symbol
POLGAMMA2
Name
(RefSeq) polymerase gamma 2
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03030
DNA replication
ath03410
Base excision repair
ath03420
Nucleotide excision repair
ath03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AT1G50840 (POLGAMMA2)
03410 Base excision repair
AT1G50840 (POLGAMMA2)
03420 Nucleotide excision repair
AT1G50840 (POLGAMMA2)
03440 Homologous recombination
AT1G50840 (POLGAMMA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ath03032
]
AT1G50840 (POLGAMMA2)
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT1G50840 (POLGAMMA2)
Enzymes [BR:
ath01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AT1G50840 (POLGAMMA2)
DNA replication proteins [BR:
ath03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AT1G50840 (POLGAMMA2)
DNA repair and recombination proteins [BR:
ath03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AT1G50840 (POLGAMMA2)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AT1G50840 (POLGAMMA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
841506
NCBI-ProteinID:
NP_175498
TAIR:
AT1G50840
UniProt:
F4I6M1
LinkDB
All DBs
Position
1:18839047..18844577
Genome browser
AA seq
1050 aa
AA seq
DB search
MAMGVSLTSHNNPLLRHLSPSSSWVSRSSSRLSSSPLPSFLFPCRRTLLQRKLASTDGNV
GYCTTTVCQGFQHSVHQRSSSVVFNGEWELRSESNKVRMVPKIIKVGNQTEVAETHQVPG
TVSAWREEANKLRERNGQIARNLDDNGYFNGSVPIISSAPSYETSQKIDYEFKPRGTTRS
TTATLNKELIGITQSEPVVSLPRKGLDVGDNMDVNPKGEGIQRPLISDKSSGTANGNKNT
VAISKVERSTEPSNVRENLGKIYDKVLIVDNVQAAKDTVAKLVNQFRNHVHSCDTEVSGI
EVKEETPVDHGELICFSIYCGPEADFGNGKSCIWVDVLGENGREVLAEFKPYFEDSFIRK
VWHNYSFDSHIIRNHGIEISGFHADTMHMARLWDSARRIKGGYSLEALTSDPKVLGGTQT
KEEAEFLGKISMKTIFGKRKLKKDGSEGKIVVIPPVEELQREDREAWISYSALDAISTLK
LYESMTKKLQLMDWHLDGKPVLGRTMLDFYHEFWRPFGELLVKMEAEGILVDREYLAEIE
KVAKAEQQVAGSRFRNWASKYCPDAKYMNIGSDTQLRQLFFGGISNSHDEVLPVEKLFKV
PNIDKVIEEGKKTPTKFRNIKLHRISDSPLSTENFTASGWPSVGGDVLKELAGKVSAEYD
FMDDVSDISLEEVVEDDDVETSETQKSKTDDETDTSAYGTAYVAFGGGERGKEACHAIAS
LCEVCSIDSLISNFILPLQGSNVSGKDGRVHCSLNINTETGRLSARRPNLQNQPALEKDR
YKIRKAFVASPGNTLVVADYGQLELRILAHLTGCKSMMEAFKAGGDFHSRTAMNMYPHVR
EAVENGQVILEWHPEPGEDKPPVPLLKDAFGSERRKAKMLNFSIAYGKTAVGLSRDWKVS
TKEAQETVDLWYNDRQEVRKWQEMRKKEAIEDGYVLTLLGRSRRFPASKSRAQRNHIQRA
AINTPVQGSAADVAMCAMLEISINQQLKKLGWRLLLQIHDEVILEGPIESAEIAKDIVVD
CMSKPFNGRNILSVDLSVDAKCAQNWYAAK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggccatgggggtttctcttacttcccacaataaccctcttcttcgccacttatctcct
tcctcttcctgggtttctcgttcctcctctcgcctctcttcttctccactcccttccttc
ctctttccttgccgtcgaacccttcttcaaaggaaactagcttccactgatggaaatgtc
ggttattgtactactacagtttgtcagggatttcagcattcggttcatcaacggtcgtct
tctgttgtgtttaacggagagtgggaacttcgatcggaatctaacaaggtaaggatggtt
cctaagattatcaaggttggaaatcagacggaggtagccgaaactcatcaagttcctgga
actgtaagtgcttggagggaagaagctaataagcttagagaaagaaatggtcaaattgct
agaaaccttgatgacaatggttatttcaatggctctgtcccaattatatctagtgctccg
tcttatgaaacctctcagaagattgattatgagttcaagcccagagggaccactaggtcc
actactgctacactcaataaggaattgattggcattacccaatctgaacctgttgtgtca
ttgccaaggaagggtttagatgttggggataatatggatgtaaatcctaaaggagaggga
atacagagacctcttataagcgataagtcttctggtaccgcaaatggaaacaagaatact
gttgccatttccaaagtggagagaagcactgaaccttcgaatgtccgtgaaaaccttggg
aaaatatatgacaaggttctcattgttgataatgtgcaagctgcgaaggataccgtggct
aagctcgtgaatcagtttaggaatcatgtccattcctgtgatacagaggtgtccgggatt
gaggttaaggaagaaacgcctgtcgaccacggtgaattaatatgtttcagtatttactgt
gggccagaagcagattttgggaatggaaaatcgtgcatctgggttgatgttcttggtgaa
aatggcagggaggtgttggccgagtttaaaccatattttgaagactcgttcatcagaaaa
gtctggcacaactacagtttcgatagccacatcattaggaaccatggaattgagatttct
ggttttcatgccgacactatgcacatggcacgattatgggattctgcacggcggataaaa
ggtggttattcgcttgaagcgcttacaagtgacccaaaagttcttgggggcacacagaca
aaggaggaagctgagttccttggtaaaatttcgatgaagactatttttggcaaacggaaa
ctgaaaaaagatggatctgaagggaaaatcgttgtcattccccctgttgaagagcttcag
cgagaagatcgagaggcttggatttcatactctgccttggatgcgataagcacactaaag
ctttacgagagcatgacaaagaaactgcaattgatggattggcatcttgatggaaagcca
gttttaggaaggacaatgttggatttttaccatgagttctggcgaccctttggtgaactt
cttgtaaaaatggaagcagaagggatacttgtagatagagagtatcttgctgagatagag
aaagtagccaaagcggaacaacaagttgctggtagtaggtttcgtaattgggcatctaag
tattgccccgatgcgaagtatatgaatattggcagtgacacacaattgcgtcagctcttt
tttggtggcatttccaacagtcatgacgaggtgcttccagttgaaaagctcttcaaagtc
cccaatattgataaggttattgaagaaggcaaaaaaacaccgacgaagtttcgaaacatc
aaactgcataggataagtgatagcccactgtcaacggaaaattttactgccagtggttgg
ccctctgtaggtggggatgttttgaaagagttagctgggaaagtttctgctgaatacgac
tttatggatgatgtctcagatatttctctggaagaagttgttgaggatgatgatgtagaa
acatcagaaacacaaaagtccaagacagatgatgaaaccgacacatctgcttatggaaca
gcatatgttgcatttggagggggtgaaaggggaaaggaggcatgtcatgctattgcctca
ttatgtgaagtttgctctatagactctttgatctcaaattttattcttccgttacaggga
agtaatgtatcaggcaaagatggtcgcgtccattgctcccttaatatcaatacagaaact
gggcgcttatcagctagaaggccaaatttgcagaaccaacctgcattggagaaggatcgg
tacaagattcgtaaggcctttgtagcatcgcctggaaatacacttgttgtggctgattat
gggcagttggaacttagaattctggcacatcttactggttgtaaaagcatgatggaagct
tttaaagcaggcggagatttccactcaaggacagccatgaatatgtatccacatgttcgt
gaagctgtagaaaatgggcaagtgatccttgaatggcatccagaacctggggaagacaag
ccacctgtgccgttgttaaaggatgcctttggttcagagagaagaaaagccaagatgctt
aacttttcaattgcgtatgggaaaaccgcggtcgggctttctagagattggaaggtctcc
actaaagaagctcaggaaacagtcgatctctggtacaatgacaggcaagaagtaaggaaa
tggcaagaaatgcgtaagaaagaagctatagaagatgggtatgtactcactttactagga
aggtctcgtagatttccggcgtcaaagtcacgtgctcagagaaatcatatccaaagagca
gcaatcaacactccagtccagggaagtgcagctgatgttgccatgtgtgcaatgttggaa
atatcgataaatcaacagttgaagaagcttggttggagattgcttctacagattcatgat
gaagtaatcttggaaggaccaattgaatcagcggagatcgcaaaggacatagttgtggac
tgtatgtctaagccctttaacggaaggaatattctctcagtcgatttatctgttgatgca
aaatgtgctcaaaactggtatgctgccaaatag
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integrated database retrieval system
