Arabidopsis thaliana (thale cress): AT1G51510
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Entry
AT1G51510 CDS
T00041
Symbol
Y14
Name
(RefSeq) RNA-binding (RRM/RBD/RNP motifs) family protein
KO
K12876
RNA-binding protein 8A
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03013
Nucleocytoplasmic transport
ath03015
mRNA surveillance pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT1G51510 (Y14)
09122 Translation
03013 Nucleocytoplasmic transport
AT1G51510 (Y14)
03015 mRNA surveillance pathway
AT1G51510 (Y14)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT1G51510 (Y14)
03041 Spliceosome [BR:
ath03041
]
AT1G51510 (Y14)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
AT1G51510 (Y14)
Spliceosome [BR:
ath03041
]
Complex C
Other components
EJC/TREX
AT1G51510 (Y14)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Nup35_RRM_2
Methyltransf_15
RRM_7
Motif
Other DBs
NCBI-GeneID:
841576
NCBI-ProteinID:
NP_564591
TAIR:
AT1G51510
UniProt:
F4I9J7
A0A178WGD6
LinkDB
All DBs
Position
1:complement(19102791..19104933)
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AA seq
202 aa
AA seq
DB search
MANIESEAVDFEPEEDDLMDEEGTAIDGADVSPRAGHPRLKSAIAGANGESAKKTKGRGF
REEKDSDRQRRLSSRDFESLGSDGRPGPQRSVEGWIILVSGVHEETQEEDITNAFGDFGE
IKNLNLNLDRRSGYVKGYALIEYEKKEEAQSAISAMNGAELLTQNVSVDWAFSSGPSGGE
SYRRKNSRYGRSQRSRSPRRRY
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacatagaatcagaagcagtcgatttcgagccagaggaggatgaccttatggac
gaagaaggtacagctattgacggagctgatgtttctccacgcgcgggacatccgaggctt
aagtcggctattgccggagctaatggcgaatcagcaaagaagaccaaaggccgtgggttt
cgcgaggagaaagattccgatcgtcagcgtcgtctttcctcacgcgatttcgaatcactt
ggttcagatggccgtcctggtccgcagagatccgttgaaggatggattatcttggtctct
ggagttcatgaggagacacaggaggaggatataaccaatgcttttggtgattttggggag
attaagaatctaaatctcaatctcgatcgccgtagtggttatgtcaagggatatgctttg
atagaatatgagaagaaggaagaagcacagagcgctatttcagcaatgaatggtgctgag
cttctaacacagaatgttagcgttgactgggccttcagcagcggtcccagtggtggtgaa
tcttacaggagaaagaactcgaggtatgggaggtcgcaacgttcaagaagtccgagaaga
cgttactga
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integrated database retrieval system
