Arabidopsis thaliana (thale cress): AT1G52160
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Entry
AT1G52160 CDS
T00041
Symbol
TRZ3
Name
(RefSeq) tRNAse Z3
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ath03016
]
AT1G52160 (TRZ3)
Enzymes [BR:
ath01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
AT1G52160 (TRZ3)
Transfer RNA biogenesis [BR:
ath03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
AT1G52160 (TRZ3)
Prokaryotic type
AT1G52160 (TRZ3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
841647
NCBI-ProteinID:
NP_175628
TAIR:
AT1G52160
UniProt:
Q8VYS2
LinkDB
All DBs
Position
1:complement(19420715..19424474)
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AA seq
890 aa
AA seq
DB search
MINSMPYLHKNLRLLRLLSSKSSPFPLSLRPFSPRSFSLSTLFSSSSSSSSMENNEATNG
SKSSSNSFVFNKRRAEGFDITDKKKRNLERKSQKLNPTNTIAYAQILGTGMDTQDTSSSV
LLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHVFLSRVCSETAGGLPGLLLTLAGIGEE
GLSVNVWGPSDLNYLVDAMKSFIPRAAMVHTRSFGPSSTPDPIVLVNDEVVKISAIILKP
CHSEEDSGNKSGDLSVVYVCELPEILGKFDLEKAKKVFGVKPGPKYSRLQSGESVKSDER
DITVHPSDVMGPSLPGPIVLLVDCPTESHAAELFSLKSLESYYSSPDEQTIGAKFVNCII
HLSPSSVTSSPTYQSWMKKFHLTQHILAGHQRKNMAFPILKASSRIAARLNYLCPQFFPA
PGFWPSQLTDNSIIDPTPSNKCSSSNLAESISAENLLKFNLRPVAIRGIDRSCIPAPLTS
SEVVDELLSEIPEIKDKSEEIKQFWNKQHNKTIIEKLWLSECNTVLPNCLEKIRRDDMEI
VILGTGSSQPSKYRNVSAIFIDLFSRGSLLLDCGEGTLGQLKRRYGLDGADEAVRKLRCI
WISHIHADHHTGLARILALRSKLLKGVTHEPVIVVGPRPLKRFLDAYQRLEDLDMEFLDC
RSTTATSWASLESGGEAEGSLFTQGSPMQSVFKRSDISMDNSSVLLCLKNLKKVLSEIGL
NDLISFPVVHCPQAYGVVIKAAERVNSVGEQILGWKMVYSGDSRPCPETVEASRDATILI
HEATFEDALIEEALAKNHSTTKEAIDVGSAANVYRIVLTHFSQRYPKIPVIDESHMHNTC
IAFDLMSINMADLHVLPKVLPYFKTLFRDEMVEDEDADDVAMDDLKEEAL
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgataaactcaatgccctatttacacaaaaacctacgccttcttcgtctcctctcttca
aagtcttctcctttccctctttctctcagacccttttctccacgatccttctctctctca
accctcttctcttcttcttcatcatcgtcttcaatggagaacaacgaagcaactaatggc
tccaagtcttcttctaattcattcgtgttcaataagcgaagagctgaaggatttgacata
accgataagaaaaaaaggaatctagaacgcaaatcccaaaagcttaatcccactaacact
attgcttacgcacagatacttggaactggaatggatacacaggatacatcatcttctgta
ttactcttctttgataagcaaagattcatctttaatgctggagagggcttgcaacgtttt
tgtacagaacataagattaaactatcaaagatagatcatgtatttttgtctcgtgtttgc
tcagagacagcaggaggacttccaggtcttctactaactctagctggtattggtgaagaa
gggctttcggtgaatgtatggggtccttcggatcttaactatttagttgatgcaatgaag
tcgtttattccacgggcagctatggttcatacacggagttttggtccctcgagtactcct
gatcctattgttcttgtgaatgatgaagttgtgaaaatatccgccattatcttaaaaccg
tgtcattctgaggaagactctggcaacaaatctggcgatctctcagttgtatatgtatgt
gaattacctgaaatattgggaaaatttgacttagagaaggctaagaaggtttttggtgtt
aagcctggtccaaaatatagtagacttcagtccggtgaatcagtgaagtcagatgaaaga
gatattacggttcatccaagtgatgttatgggaccttcactccctggtcccattgttctc
cttgtggactgtccaacagagtcgcacgctgcagaactgttctcacttaagtctttggag
agttattattcatctcctgacgagcaaaccattggagcaaagtttgtaaattgtattata
catttgagcccatcttctgtgacaagtagtcctacttaccaaagctggatgaagaagttt
catttgactcaacacattcttgctggccatcaaaggaagaatatggctttcccaattctg
aaagcaagttcaagaatcgctgccagacttaactatctatgcccgcagttctttcctgct
cctggattttggccttctcaacttaccgataactcgattattgatcccactccttcgaac
aagtgctcaagttcaaatcttgctgaaagcatttctgctgaaaatctcctcaagttcaat
ttgcgtcccgtggctattcgtgggatcgacagatcgtgtatccctgctccactaacatcc
tcagaagtagtggatgagctactttctgaaattccggagataaaagataaaagtgaagaa
atcaagcagttctggaataaacaacacaacaagacaatcatcgaaaagctatggctgtct
gagtgcaatactgttcttccaaactgtcttgaaaagattagacgagatgacatggagatt
gttattctaggcactggttcgtctcagccttcaaaataccgaaacgttagtgcaattttt
attgacttgttctctagaggtagtcttctcctagattgtggtgaaggaaccttgggccag
cttaaaagaagatatggtttagacggtgcagatgaggcggttagaaagttgagatgtata
tggatctctcacatccacgctgatcaccatacaggtcttgcgaggattctagctcttagg
agcaagcttttgaaaggagtgactcacgagccagtgattgtggtggggccgaggccgctt
aaacgctttcttgatgcatatcaaagacttgaggatttagatatggagtttcttgattgt
agaagcaccacagcaacttcttgggcttctttagagagtgggggcgaagctgagggttct
ttgtttactcaaggaagtcctatgcagagtgtcttcaaaagatctgatatctcgatggat
aattcttcggttttgctgtgtttaaagaatctgaagaaggttcttagcgaaattggattg
aatgatttgattagttttcctgttgtacattgtcctcaagcgtatggtgttgttatcaag
gcagctgaaagagtaaatagtgttggagaacaaatccttggatggaaaatggtttattcg
ggcgactcaagaccttgccctgagacggtcgaagcatcacgagatgcaacaattcttata
catgaggcaacgtttgaagatgcgttgatagaagaagctttggcgaagaatcacagcacg
actaaagaagcaatcgatgtgggatctgcggcgaatgtgtatcggattgttctcacacat
tttagccagagatatccgaagattccagtgattgatgagtcgcatatgcataatacctgc
attgcctttgatctgatgagtataaacatggcggatttgcatgtgcttcctaaggttttg
ccgtatttcaaaactcttttcagagatgagatggttgaagatgaggatgcagatgatgtt
gccatggatgacttaaaggaagaagctttgtga
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