KEGG   Arabidopsis thaliana (thale cress): AT1G52280
Entry
AT1G52280         CDS       T00041                                 
Symbol
RABG3d
Name
(RefSeq) RAB GTPase homolog G3D
  KO
K07897  Ras-related protein Rab-7A
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04144  Endocytosis
ath04145  Phagosome
ath04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    AT1G52280 (RABG3d)
   04145 Phagosome
    AT1G52280 (RABG3d)
   04148 Efferocytosis
    AT1G52280 (RABG3d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT1G52280 (RABG3d)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT1G52280 (RABG3d)
   04031 GTP-binding proteins [BR:ath04031]
    AT1G52280 (RABG3d)
Membrane trafficking [BR:ath04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    AT1G52280 (RABG3d)
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AT1G52280 (RABG3d)
  Exosomal proteins of other body fluids (saliva and urine)
   AT1G52280 (RABG3d)
  Exosomal proteins of colorectal cancer cells
   AT1G52280 (RABG3d)
  Exosomal proteins of bladder cancer cells
   AT1G52280 (RABG3d)
GTP-binding proteins [BR:ath04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    AT1G52280 (RABG3d)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA ATP_bind_1 Septin RsgA_GTPase cobW nSTAND3 AAA_16 ATPase_2 PduV-EutP AAA_24 AAA_7 NACHT ABC_tran AAA_22 RNA_helicase NTPase_1 AAA_14 SRPRB TniB MCM ATP-synt_ab AAA_5
Other DBs
NCBI-GeneID: 841658
NCBI-ProteinID: NP_175638
TAIR: AT1G52280
UniProt: Q9C820 A0A5S9WP77
LinkDB
Position
1:complement(19467815..19469586)
AA seq 206 aa
MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF
VVLGNKTDVDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECITKNAFKNE
PEEEPYLPDTIDVAGGQQQRSTGCEC
NT seq 621 nt   +upstreamnt  +downstreamnt
atgtcttctcgccggagagttcttctcaaggttatcattctcggtgatagcggtgttggg
aagacttcgttgatgaatcagtttgtgaatcgaaagtttagtaatcagtataaagctacg
attggagcagattttttgactaaagaggttcaaatagatgacagaatcttcactttacag
atttgggatactgctggacaagaaagatttcaaagtttgggagttgcgttttaccgagga
gcggattgttgtgttcttgtctatgatgtcaatgttatgaaatcttttgataatcttaat
aactggagggaagagttcttgattcaggctagtccttcagatcctgaaaactttccattt
gttgtgttggggaacaagactgatgttgatggtggaaagagcagagtggtttctgagaaa
aaggcaaaggcatggtgtgcatctaaaggaaacattccttactttgagacttccgccaaa
gaaggattcaatgtagatgcggctttcgaatgcattaccaaaaatgctttcaagaatgaa
cctgaagaagaaccgtaccttcccgacaccattgatgttgccggaggtcagcaacaaaga
tcaacagggtgtgaatgctaa

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