Arabidopsis thaliana (thale cress): AT1G52280
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Entry
AT1G52280 CDS
T00041
Symbol
RABG3d
Name
(RefSeq) RAB GTPase homolog G3D
KO
K07897
Ras-related protein Rab-7A
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04144
Endocytosis
ath04145
Phagosome
ath04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
AT1G52280 (RABG3d)
04145 Phagosome
AT1G52280 (RABG3d)
04148 Efferocytosis
AT1G52280 (RABG3d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT1G52280 (RABG3d)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ath04147
]
AT1G52280 (RABG3d)
04031 GTP-binding proteins [BR:
ath04031
]
AT1G52280 (RABG3d)
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
AT1G52280 (RABG3d)
Exosome [BR:
ath04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AT1G52280 (RABG3d)
Exosomal proteins of other body fluids (saliva and urine)
AT1G52280 (RABG3d)
Exosomal proteins of colorectal cancer cells
AT1G52280 (RABG3d)
Exosomal proteins of bladder cancer cells
AT1G52280 (RABG3d)
GTP-binding proteins [BR:
ath04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
AT1G52280 (RABG3d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
ATP_bind_1
Septin
RsgA_GTPase
cobW
nSTAND3
AAA_16
ATPase_2
PduV-EutP
AAA_24
AAA_7
NACHT
ABC_tran
AAA_22
RNA_helicase
NTPase_1
AAA_14
SRPRB
TniB
MCM
ATP-synt_ab
AAA_5
Motif
Other DBs
NCBI-GeneID:
841658
NCBI-ProteinID:
NP_175638
TAIR:
AT1G52280
UniProt:
Q9C820
A0A5S9WP77
LinkDB
All DBs
Position
1:complement(19467815..19469586)
Genome browser
AA seq
206 aa
AA seq
DB search
MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF
VVLGNKTDVDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECITKNAFKNE
PEEEPYLPDTIDVAGGQQQRSTGCEC
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcgccggagagttcttctcaaggttatcattctcggtgatagcggtgttggg
aagacttcgttgatgaatcagtttgtgaatcgaaagtttagtaatcagtataaagctacg
attggagcagattttttgactaaagaggttcaaatagatgacagaatcttcactttacag
atttgggatactgctggacaagaaagatttcaaagtttgggagttgcgttttaccgagga
gcggattgttgtgttcttgtctatgatgtcaatgttatgaaatcttttgataatcttaat
aactggagggaagagttcttgattcaggctagtccttcagatcctgaaaactttccattt
gttgtgttggggaacaagactgatgttgatggtggaaagagcagagtggtttctgagaaa
aaggcaaaggcatggtgtgcatctaaaggaaacattccttactttgagacttccgccaaa
gaaggattcaatgtagatgcggctttcgaatgcattaccaaaaatgctttcaagaatgaa
cctgaagaagaaccgtaccttcccgacaccattgatgttgccggaggtcagcaacaaaga
tcaacagggtgtgaatgctaa
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