Arabidopsis thaliana (thale cress): AT1G54340
Help
Entry
AT1G54340 CDS
T00041
Symbol
ICDH
Name
(RefSeq) isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00020
Citrate cycle (TCA cycle)
ath00480
Glutathione metabolism
ath01100
Metabolic pathways
ath01110
Biosynthesis of secondary metabolites
ath01200
Carbon metabolism
ath01210
2-Oxocarboxylic acid metabolism
ath01230
Biosynthesis of amino acids
ath04146
Peroxisome
Module
ath_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ath_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AT1G54340 (ICDH)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
AT1G54340 (ICDH)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AT1G54340 (ICDH)
Enzymes [BR:
ath01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
AT1G54340 (ICDH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-GeneID:
841875
NCBI-ProteinID:
NP_175836
TAIR:
AT1G54340
UniProt:
Q9SLK0
LinkDB
All DBs
Position
1:20283326..20286786
Genome browser
AA seq
416 aa
AA seq
DB search
MEFEKIKVINPVVEMDGDEMTRVIWKFIKDKLIFPFLELDIKYFDLGLPNRDFTDDKVTI
ETAEATLKYNVAIKCATITPDEARVREFGLKKMWRSPNGTIRNILNGTVFREPIICRNIP
RLVPGWTKPICIGRHAFGDQYRATDLIVNEPGKLKLVFEPSGSSQKTEFEVFNFTGGGVA
LAMYNTDESIRAFAESSMYTAYQKKWPLYLSTKNTILKIYDGRFKDIFQEVYEANWRSKY
EAAGIWYEHRLIDDMVAYAMKSEGGYVWACKNYDGDVQSDFLAQGYGSLGMMTSVLVCPD
GKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDSNAALLSYTEKL
EAACMGTVESGKMTKDLALLIHGAKVRRDQYVNTEEFIDAVAWELKRRLLGNNSRL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgagaagatcaaggtgatcaatcccgttgttgaaatggatggagacgaaatg
actcgagttatctggaaattcatcaaagacaagcttattttccctttcctggagctggat
atcaaatactttgatcttggactgcctaaccgcgatttcactgatgataaggttactata
gagactgctgaagctactttaaagtataatgtggctattaagtgtgcgacgattactccg
gatgaagctcgtgttagggagttcggcttaaagaaaatgtggaggagtcctaatggaact
ataaggaacattttaaacggcacagttttcagggaacctatcatttgcagaaacatccct
cgtcttgttccaggatggacgaagccaatctgtattggaaggcatgcttttggtgatcag
tatagagccactgatctcattgtcaatgaaccaggaaaactgaaactagtttttgagcca
agtggatcttctcagaaaacagaattcgaagtcttcaatttcaccggtggaggtgttgct
ttagccatgtataacactgatgagtctattcgtgcatttgctgagtcctcgatgtacaca
gcttaccagaaaaagtggccactttacctctccacaaaaaacaccatcctcaaaatatat
gatggaagattcaaggatatattccaagaagtttatgaagctaactggagatccaagtat
gaagcagcagggatatggtatgagcatcgtttgatagatgatatggttgcatatgccatg
aaaagtgaagggggttacgtctgggcatgcaagaattacgatggagatgtacagagcgat
ttcttagcccaaggatatggatctctgggaatgatgacttcggtgttggtttgtccagat
ggaaagaccattgaagcagaagcagctcatggcacagttacacgccactacagagttcac
cagaaaggtggtgaaacaagcaccaacagcatagcctctatttttgcttggtccagaggc
cttgcccacagggcaaagctggacagcaatgccgcactcttgagctatactgagaaacta
gaagcagcttgcatggggacggtggagtctggcaaaatgaccaaggatctagctcttctg
atccacggagccaaggttaggagggatcagtatgtgaatacggaagagttcattgatgcg
gtggcatgggagttaaaaagaagattgttaggcaacaactccaggttgtga
DBGET
integrated database retrieval system