Arabidopsis thaliana (thale cress): AT1G55490
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Entry
AT1G55490 CDS
T00041
Symbol
CPN60B
Name
(RefSeq) chaperonin 60 beta
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT1G55490 (CPN60B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT1G55490 (CPN60B)
03110 Chaperones and folding catalysts [BR:
ath03110
]
AT1G55490 (CPN60B)
03029 Mitochondrial biogenesis [BR:
ath03029
]
AT1G55490 (CPN60B)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ath04147
]
AT1G55490 (CPN60B)
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AT1G55490 (CPN60B)
Messenger RNA biogenesis [BR:
ath03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AT1G55490 (CPN60B)
Chaperones and folding catalysts [BR:
ath03110
]
Heat shock proteins
HSP60 / Chaperonin
AT1G55490 (CPN60B)
Mitochondrial biogenesis [BR:
ath03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AT1G55490 (CPN60B)
Exosome [BR:
ath04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AT1G55490 (CPN60B)
Exosomal proteins of other body fluids (saliva and urine)
AT1G55490 (CPN60B)
Exosomal proteins of breast cancer cells
AT1G55490 (CPN60B)
Exosomal proteins of colorectal cancer cells
AT1G55490 (CPN60B)
Exosomal proteins of bladder cancer cells
AT1G55490 (CPN60B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
841996
NCBI-ProteinID:
NP_001320638
TAIR:
AT1G55490
UniProt:
P21240
A0A178W724
LinkDB
All DBs
Position
1:complement(20715563..20719261)
Genome browser
AA seq
600 aa
AA seq
DB search
MASTFTATSSIGSMVAPNGHKSDKKLISKLSSSSFGRRQSVCPRPRRSSSAIVCAAKELH
FNKDGTTIRRLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP
VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAK
ALVTELKKMSKEVEDSELADVAAVSAGNNDEIGNMIAEAMSKVGRKGVVTLEEGKSAENN
LYVVEGMQFDRGYISPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVLEDAIRGGYP
ILIIAEDIEQEALATLVVNKLRGTLKIAALRAPGFGERKSQYLDDIAILTGATVIREEVG
LSLDKAGKEVLGNASKVVLTKETSTIVGDGSTQDAVKKRVTQIKNLIEQAEQDYEKEKLN
ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKV
DAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFGYNAATG
KYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGNPMDNSGYGY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaactttcactgccacatcttctattggttcaatggttgctccgaatggtcac
aaatctgataagaaacttatcagcaagttgtcttcaagctcatttggaaggagacaaagt
gtgtgtcctagacccagaagatccagttctgcaattgtgtgcgcagcaaaggaattacat
ttcaacaaagatgggactaccattaggagacttcaagctggtgtcaacaagctcgcagat
cttgttggtgttacacttggacccaaaggacgaaatgttgttcttgagagcaagtatgga
tcaccacgaattgttaatgatggtgtgactgttgcaagagaggttgagttggaagacccg
gttgagaacattggcgctaagcttgtgaggcaagcggctgccaaaaccaatgacttggct
ggtgacggtacaacaacatctgttgttcttgcacaaggttttatcgctgagggtgtcaag
gtggtagctgctggtgcaaaccctgttttgatcaccagaggtattgagaagacagcaaag
gctttggttaccgagctcaagaaaatgtctaaggaggttgaagacagtgaacttgcagat
gttgcagctgttagtgcgggtaacaacgacgaaattggaaatatgattgctgaagcaatg
agcaaagtgggcaggaaaggtgtggtgacccttgaggagggtaaaagtgccgagaacaac
ctctacgtcgtagaaggaatgcaatttgaccgtggttatatctctccttactttgtgaca
gacagcgagaaaatgtccgtcgagttcgacaattgcaagttacttctcgttgacaagaaa
attaccaatgcaagggatcttgttggtgttttggaggatgcaattagaggcggataccca
atattaattattgctgaagacattgaacaagaagctttagcgactcttgttgtaaacaag
cttagaggtacactgaagatagcagctctcagagctccagggtttggagagcgcaagagc
caataccttgatgatattgccattctaactggagcaactgtgatccgtgaggaagttggt
ctttcacttgacaaagctggaaaagaggttcttggtaatgcttcaaaggttgtcctcaca
aaggagacctcgaccatagtgggtgatggaagcacacaggatgcagtgaaaaagcgtgtt
acacagattaaaaatcttattgagcaagcggagcaagattacgagaaggagaaactcaat
gagagaattgcaaagctctctggtggagttgctgtgattcaggttggagcacaaactgag
acagaactcaaagagaagaagttgagagttgaagatgctcttaatgcaacaaaggccgct
gtcgaggaaggtattgttgttggtggtggttgcactctgcttcgtcttgcttccaaggtt
gatgccattaaagccacgcttgataatgatgaagaaaaggttggagcggatatagttaaa
agagcactaagttaccccctaaaactaatcgccaagaatgctggtgttaatggaagtgta
gttagcgagaaggtgctttccaacgataacgtgaaattcggttacaatgctgcaaccggc
aagtacgaggatttgatggctgcaggaatcatcgatccaacaaaggttgtgagatgttgc
ttggaacacgcagcttcggttgcaaagactttcttgatgtcggactgcgttgttgttgag
atcaaggaacctgaaccagttcccgtcggcaacccaatggacaactcaggatatggatac
taa
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