Arabidopsis thaliana (thale cress): AT1G55620
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Entry
AT1G55620 CDS
T00041
Symbol
CLC-F
Name
(RefSeq) chloride channel F
KO
K03281
chloride channel protein, CIC family
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ath02000
]
AT1G55620 (CLC-F)
Transporters [BR:
ath02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AT1G55620 (CLC-F)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
842011
NCBI-ProteinID:
NP_564698
TAIR:
AT1G55620
UniProt:
Q8RXR2
A0A178W259
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All DBs
Position
1:complement(20787074..20791208)
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AA seq
781 aa
AA seq
DB search
MSSGGAGEYNEDRHLLRSTDGDEVGIGGGEGDLDVESQSPAIRSGAGGVRDLFKHIDRRF
SLSGRRLSFKRMENIRVDRERHNPSSSSAFSAAGEEDGGGISNLHSVDDRNDEYGFDEEV
LGDSAPPEWALLLIGCLIGVAAGICVAGFNKGVHVIHEWAWAGTPNEGAAWLRLQRLADT
WHRILLIPVTGGVIVGMMHGLLEILDQIRQSNSSQRQGLDFLAGIYPVIKAIQAAVTLGT
GCSLGPEGPSVDIGKSCANGFALMMENNRERRIALTAAGAASGIASGFNAAVAGCFFAIE
TVLRPLRAENSPPFTTAMIILASVISSTVSNALLGTQSAFTVPSYDLKSAAELPLYLILG
MLCGAVSVVFSRLVTWFTKSFDFIKDKFGLPAIVCPALGGLGAGIIALKYPGILYWGFTN
VEEILHTGKSASAPGIWLLAQLAAAKVVATALCKGSGLVGGLYAPSLMIGAAVGAVFGGS
AAEIINRAIPGNAAVAQPQAYALVGMAATLASMCSVPLTSVLLLFELTKDYRILLPLMGA
VGLAIWVPSVANQGKESDSSEGRSTGRGYSSLSPSERKTEGVWRHTDNADSLELTVIENP
DHNSFLDEETILEDLKVMRVMSKNYVKVSSGTTLREARNILKESHQNCIMVVDDDDFLAG
ILTHGDIRRYLSNNASTILDENTCPVSSVCTKKISYRGQERGLLTCYPDATVGVAKELME
ARGVKQLPVVKRGEVIHKGKRRKLLGLLHYDSIWTFLRDEMSRRRSINDRRKDKEVGTNG
H
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgggaggagccggagagtataacgaagacagacatctgttacgatccaccgac
ggagatgaagtcggcattggcggaggagagggtgatctagatgttgaatctcagtctccg
gctatcagaagtggagctggaggagttagggatctgttcaagcatatagatcggagattt
tctctttccggtcgtcgtttaagttttaaacggatggagaatatcagagtcgatagagag
cgccataatccttcttcttcttcagcgttttcggctgctggagaagaagatggtggtggt
atcagtaatttacatagcgttgatgatcgaaatgacgagtacgggtttgatgaagaagtt
ctcggagatagtgctccacctgagtgggctctgcttctcattggctgtcttattggtgtt
gccgctggaatttgtgtcgccggcttcaataaaggggttcatgtcattcatgagtgggca
tgggctggtactcccaacgaaggtgctgcatggcttcgtctacagagactagctgatact
tggcatcggattcttctaattccggtcactggaggtgttatagtaggaatgatgcacggt
ttgcttgagatcttagaccaaataaggcaatctaattcttctcaaagacaaggactagat
tttcttgctggtatttatccagtgataaaggccatccaagctgctgtgacccttggtaca
ggatgttcactgggtcctgagggacctagcgttgacattggaaaatcatgtgccaacggt
tttgcactcatgatggaaaacaacagagaaagaagaatagctctcaccgcagctggtgcg
gcttctgggattgcatctggtttcaatgcagcagtggcgggttgtttctttgctattgaa
actgttttaagacctttacgtgccgagaactcgcctccatttaccactgcaatgataata
ttggcctctgttatatcatcgactgtgtcaaatgctctgcttgggactcaatcagctttc
acagttccctcatacgacctgaagtctgctgcagagctccctctgtacctgatactaggc
atgctttgcggtgctgtcagtgttgttttttctcggctcgtcacgtggtttaccaagtca
ttcgatttcatcaaagacaaatttggtcttcctgctatcgtgtgccctgcactaggtggt
ttaggagctggaattattgctctcaagtaccctggaattttgtattgggggtttacaaat
gttgaggaaatcctgcatactggaaaaagtgcttcagctcctggaatctggttattagct
cagttagccgctgcaaaagttgtggctacagctctttgcaaaggctctgggcttgtaggt
ggtctatatgcaccaagtttgatgattggtgctgctgttggtgctgtatttgggggttcg
gctgctgagattattaacagagctattcctggtaatgctgctgttgctcaaccacaagct
tatgctctggttggaatggcagcgacactagcttcaatgtgctctgttcccttaacatca
gtattactgctgttcgagctaacgaaagattatagaattttgcttcccctcatgggagca
gttggtttagcaatatgggttccctctgtggcaaaccaaggcaaagagagtgattcatct
gaaggtcgtagcacaggaagaggatactcttctctttcaccttccgaacgtaaaaccgaa
ggagtctggagacatacggataatgctgactcccttgagcttaccgtcatagagaaccct
gaccataattcctttttggatgaagagactattctggaagacttaaaagttatgcgggtt
atgtcaaagaactatgtgaaagtttcttcaggaacaactctaagagaagcaagaaacatc
cttaaagagagccaccaaaactgcattatggtggtcgatgacgatgattttctagctgga
atcctaacacacggtgacataagaagatacttgtccaataacgcctctacaatcttagat
gagaatacatgtccggtttcttctgtatgtactaagaaaataagctatcgaggccaagaa
cgcggtttacttacttgttatccagacgccacagttggtgtagccaaggagttgatggag
gctagaggtgtaaagcaattacctgttgtaaaacgaggtgaagtaattcacaaagggaaa
cgaaggaaactgcttggcctccttcattacgattccatttggacttttctcagagatgaa
atgagtcgtaggagatcgatcaacgaccggagaaaagacaaagaggttggtacaaatggg
cattga
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