KEGG   Arabidopsis thaliana (thale cress): AT1G55915
Entry
AT1G55915         CDS       T00041                                 
Name
(RefSeq) zinc ion binding protein
  KO
K22685  DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ath01002]
    AT1G55915
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ath03400]
    AT1G55915
Peptidases and inhibitors [BR:ath01002]
 Metallo peptidases
  Family M80
   AT1G55915
DNA repair and recombination proteins [BR:ath03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     AT1G55915
SSDB
Motif
Pfam: WLM Zn_ribbon_RanBP zf-Sec23_Sec24 YgjP-like
Other DBs
NCBI-GeneID: 842042
NCBI-ProteinID: NP_001319245
TAIR: AT1G55915
UniProt: Q0WPG7
LinkDB
Position
1:20907477..20910911
AA seq 404 aa
MSSANLEDLNKVWEIKALKRKPREDEARKILEKVANQVQPIMTRRKWRVKLLSEFCPTNP
RLLGVNVNRGVQVKLRLRRVNHDLDFLSYHEILDTMLHELCHNAHGPHNASFYKLWDELR
KECEELMSKGITGTGQGFDMPGKRLGGLSRQPSLSFLRATAATAAEKRVRAGTLLPSGPQ
RLGGDSSIMSDLSPIQAAAMAAERRLLDDIWCGSQSTDALEDEENDSDTYKEPVSIRETC
TSVNGKSVKRCNSWSNAHSCPPSSSHQQGSDVIDLTEESFEIRCTKRNRSPGDQGPSCAK
DVPNAGVMKSSIPLPSTSYNANQSREESTMWECAECTLLNPSLAPICELCTAAKPKEREM
KHKVWSCKFCTLENEVKLEKCEACGQWRYSYGAPLSTGAPNVGT
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgagttcggcgaatttggaagatttgaacaaggtctgggaaataaaggctttgaagagg
aaacctagagaagatgaagcgaggaagattctggagaaagtagctaatcaggttcagccg
attatgactagacgaaaatggcgcgtcaagcttctctctgaattctgcccaacaaatcca
aggcttttgggggtgaatgtaaatagaggcgtgcaagtgaaattgaggcttaggagggta
aaccatgatttagatttcttatcgtatcatgaaattctcgacaccatgctccacgagctt
tgccacaacgctcatggtcctcataacgcaagtttctataagctttgggatgaacttcga
aaggaatgcgaggagttgatgtcaaagggtattacagggacgggacagggatttgatatg
cctggtaagcgtttgggtggactttctcgtcagccttctctatcatttctcagagcaact
gcagctacagcagcagaaaaaagagtgcgtgcgggaactcttttaccttcaggacctcaa
cgtcttggtggtgatagcagcattatgtcagatcttagtccaattcaggctgctgcaatg
gctgcagaaaggcgtttacttgatgatatttggtgtggttcccaatccacagatgcttta
gaagatgaagagaatgatagtgacacatataaggaacctgtttccatcagggaaacttgt
acgagcgtgaatggaaagtcagtaaaacgatgtaatagctggtccaatgcccattcttgt
cctccatcttccagtcatcaacagggatcagatgtcattgatttgactgaagaatctttt
gaaataagatgtactaaaagaaatcgcagcccaggtgatcagggtccttcttgtgccaaa
gatgtaccgaacgctggtgtcatgaagtcatcgattcctttgccatcgacgagttacaat
gcaaaccaaagcagagaagaatccacaatgtgggagtgtgcagaatgcaccttattgaac
ccgtcattggctccaatatgtgagctatgcactgccgcaaagccaaaggaaagggagatg
aagcacaaagtctggtcttgcaaattctgcacgcttgaaaatgaggtgaagttagagaaa
tgtgaggcttgtggtcagtggaggtactcgtatggagcaccattgtcaactggtgctcct
aatgtcggcacttga

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