Arabidopsis thaliana (thale cress): AT1G56290
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Entry
AT1G56290 CDS
T00041
Name
(RefSeq) CwfJ-like family protein
KO
K24940
CWF19-like protein 2
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT1G56290
Spliceosome [BR:
ath03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
AT1G56290
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
842082
NCBI-ProteinID:
NP_564716
TAIR:
AT1G56290
UniProt:
Q93ZX4
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All DBs
Position
1:21075262..21078797
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AA seq
692 aa
AA seq
DB search
MFSGIKIIPRDEVHDDSWEGEREKSKGGKDRRRKNKDVNRKERRGEGSKRDGKKIAKSGD
GETVDDDLLEGDIVRKKMGLDWMLPPTRKADPNPASDVEDKFEESAPEVTKVNPRELNPY
LKENGTGYPEEESEKKHGKDQLLPSSVVGDGGASWRMKALKRAKEQAAREGLRLEEVAGE
RYGSLGNLVESVASQRAAPSRAHLNAINNRRRGENEKNDSEKKPKERISEKGNNREYLKG
ESLNHRVLRAPKTDPSLSWGKRKSQTHRNEDSKLISEAAAHMNKFSNDGNFMKEMLSKQK
NVSVSPVETRGDHRSDVEQEALPSETNKDDEGTLPSMENLSVNKLAAKALQLRMKGKHEE
AQKIMEEAERLKAKQAVGDDSSKDHHSIRTAVRYPVKDMSGRRKNEDDTDMHLAKSIMQN
KQYKTSNQAADDEYEYGDAPSKKSRKRESSSNIPEKDNRVKRIMTQQERCLFCFENPKRP
KHLVVSIANFTYLMLPQHQPLVQGHCCILPMQHEAASRSVDDNVWDEIRNFKKCLIMMYA
KEGKDAVFLETVIGLSQQRRHCLIECIPIPQEIAKEGPLYFKKAIDEAESEWSQHNAKKL
IDTSVKGLRNSIPKNFPYFHVEFGLDKGFVHVIDDEQQFNSNLGLNVIRGMLELPEEDMY
RRRRQESVESQKKAVATFAREWEHFDWTKQLD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgttttctgggataaagatcatacctcgtgatgaggtgcatgatgatagttgggagggg
gaaagagagaaatctaaaggtgggaaggatagaagaagaaagaacaaggacgtaaataga
aaggagcgtaggggagaaggaagtaagagagatgggaagaagattgccaagagtggagat
ggcgagaccgttgatgatgacttgcttgaaggggatattgttagaaagaaaatgggtctc
gattggatgctgccgccaacccgaaaggctgatccaaaccctgcttcagatgtagaggat
aaatttgaagaaagtgcacctgaggtaactaaagttaacccaagggaactaaatccttat
ttgaaagaaaatggaaccggttatccagaggaagaatctgagaaaaaacatggtaaagac
cagcttttaccttcttcggttgttggagatgggggtgcaagttggagaatgaaagcactc
aagcgtgcgaaagaacaggctgcgagagaagggctaaggcttgaggaggttgctggcgag
cgatatggttctcttggtaaccttgttgagtctgtcgcatctcaaagagcagctccatct
cgtgcccatttgaatgccataaataatagaagaagaggggaaaatgaaaagaatgattca
gaaaaaaaaccaaaagaaagaatttctgagaagggtaataatcgggagtatttgaaaggt
gagtcgttgaaccatcgtgtattgagagcccccaaaaccgacccttctttatcctgggga
aagagaaagagccaaactcatagaaacgaagactcgaagctgatatctgaagctgcagct
cacatgaataagttttccaatgacggaaatttcatgaaggaaatgctttctaagcagaag
aatgtatcagtgtctcccgtagagactcgtggagatcacagaagtgatgtggagcaggaa
gcattaccgtcagagaccaataaggatgacgaagggactcttccgagtatggaaaattta
agtgtgaataaactggctgctaaagccttacagctccgtatgaaggggaaacatgaagaa
gcccagaaaattatggaagaagcggaaaggctgaaagcaaaacaagctgttggagacgat
tcatccaaagaccaccactccatcagaaccgcagtgagatatcctgtcaaagatatgtcg
ggtagaaggaagaatgaagatgatacggatatgcatctagccaagagcataatgcagaac
aaacagtacaaaacatcgaatcaagctgctgatgatgagtatgaatatggagacgctcca
agcaaaaagtcccggaagcgggaatcgtcaagtaacattcctgaaaaggacaaccgtgtg
aaacgtattatgacccagcaagaacgctgtctcttctgttttgagaacccaaagcggccg
aaacatttagttgtgtccattgccaacttcacctatctgatgttaccacaacatcagccc
cttgtccaaggccattgctgtatcttgccaatgcagcacgaggcagccagcagaagtgtt
gacgacaatgtttgggacgagattcgtaatttcaaaaagtgtcttataatgatgtatgca
aaagaaggaaaagacgcagtgtttctggagacagtgattggtttgtctcagcaacgtcgc
cactgtttgatcgagtgtatcccaatcccccaagagatagcaaaagaaggtcctttatac
ttcaagaaggcgatcgatgaagcggaaagtgaatggagtcagcacaatgcgaagaagctc
atagacactagcgtgaaaggtctgaggaactctataccgaagaatttcccttacttccac
gttgagtttggtttagacaaagggtttgttcacgtgattgatgatgaacaacagttcaat
agcaatcttggactaaatgtaatcagaggaatgctcgagttaccagaagaagatatgtat
agacgtagaaggcaggagtcggtggagagccagaagaaggcggttgcgacctttgcccgc
gaatgggaacactttgattggacgaaacagcttgattaa
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