Arabidopsis thaliana (thale cress): AT1G56440
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Entry
AT1G56440 CDS
T00041
Symbol
TPR5
Name
(RefSeq) Tetratricopeptide repeat (TPR)-like superfamily protein
KO
K23002
RNA polymerase II-associated protein 3
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT1G56440 (TPR5)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
AT1G56440 (TPR5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP3_C
TPR_1
TPR_2
TPR_8
TPR_11
TPR_12
TPR_14
TPR_16
TPR_10
ANAPC3
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
842097
NCBI-ProteinID:
NP_001319255
TAIR:
AT1G56440
UniProt:
F4I546
LinkDB
All DBs
Position
1:complement(21138515..21141644)
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AA seq
466 aa
AA seq
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MARSPSKHGRDQTQDWELSLKDKDKKIKQQPANSSNPSSETFRPSGSGKYDFAKKYRSIR
DLSSSLIGESLLDSSSEKEQGNEFFKQKKFNEAIDCYSRSIALSPNAVTYANRAMAYLKI
KRYREAEVDCTEALNLDDRYIKAYSRRATARKELGMIKEAKEDAEFALRLEPESQELKKQ
YADIKSLLEKEIIEKATGAMQSTAQELLKTSGLDKKIQKPKTEMTSKPVTLVAKTNRDIV
QPVLGSNESSGKKLIENIQPEEKSKEGSMKIPAITEILDSKKVTPGSQSYEKEAKPSDRN
GTQPSGPENQVSKQLELKPSVQELAAHAASLAMTEASKNIKTPKSAYEFENSWRSFSGDS
ALRSQLLKVTTPSSLPQIFKNALTSPVLVDIIKCVASFFTEDMDLAVKYIENLTKVPRFN
MLVMCLTSTEKNELLKIWEDVFCNKATPMEYAEVLDKLRSRYCLKQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggctaggtcaccgagcaaacacggccgcgatcaaactcaggattgggaactctcattg
aaggataaagacaagaagattaagcaacaacctgctaattcgtcgaatccgagtagtgag
acgttcagaccaagtgggtcagggaaatatgactttgctaaaaagtatcgttccattagg
gatttgtcgagtagtttgattggagaaagtctattggattctagttcagagaaggagcag
ggtaatgaattcttcaagcagaagaagttcaatgaggcgattgattgttactctcggagc
attgctttatcgccaaatgctgtgacttatgcaaatcgagcaatggcttaccttaaaatc
aaaagatatcgagaggctgaggttgactgcacagaagctttaaatctggatgatcgatat
ataaaagcttactcacgccgagcaacagcaagaaaagaactcggcatgattaaagaagcc
aaagaagatgctgagtttgccttaagattggagcctgagagccaggaacttaagaagcaa
tatgccgatatcaaatctttgctcgagaaagaaatcattgagaaagccactggagcaatg
caaagcactgcacaagaattactcaaaacatcaggtttagataagaaaatacaaaagcca
aagacagaaatgacttcaaagccagtgaccctagtggccaaaacgaacagggatattgtt
cagcctgttctaggtagcaatgaaagttcgggaaagaagctcattgaaaatatacaacct
gaggagaaaagcaaagaaggttccatgaaaattccagctatcacggaaattctagacagc
aagaaagtgacgcctggaagccaaagttatgaaaaggaggcgaagccttctgacagaaat
ggtactcagccttctggaccggaaaaccaggtttctaaacagctggaactaaagccatca
gtacaagagcttgctgctcatgcagcgtcacttgcgatgactgaagcttctaaaaacatt
aaaaccccaaaatctgcttacgaatttgagaactcttggcggagtttttccggcgacagt
gccctacgaagccaattgttgaaggtcacgactccgagctctttacctcagattttcaag
aacgccctgacctctccggtgctggttgacataatcaaatgtgtagcctcattcttcact
gaagacatggatttggcagttaaatacattgagaacctaacaaaggttcctagattcaac
atgctcgtcatgtgccttacctcaaccgagaaaaacgagctactgaagatatgggaagat
gttttctgcaataaagcaaccccaatggagtatgcagaggtcttagacaaactaaggtca
agatactgccttaaacagtaa
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