KEGG   Arabidopsis thaliana (thale cress): AT1G59890
Entry
AT1G59890         CDS       T00041                                 
Symbol
SNL5
Name
(RefSeq) SIN3-like 5
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ath03036]
    AT1G59890 (SNL5)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     AT1G59890 (SNL5)
    REST complex
     AT1G59890 (SNL5)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    AT1G59890 (SNL5)
SSDB
Motif
Pfam: Sin3a_C Sin3_corepress PAH PAH_ZNF598
Other DBs
NCBI-GeneID: 842283
NCBI-ProteinID: NP_176197
TAIR: AT1G59890
UniProt: Q9XIE1
LinkDB
Position
1:22043643..22051114
AA seq 1162 aa
MKRVREEVYVEPQMRGPTVSSRGETNGRPSTISGGGTTGGLTTVDALTYLKAVKDMFQDN
KEKYETFLGVMKDFKAQRVDTNGVIARVKDLFKGYDDLLLGFNTFLPKGYKITLQPEDEK
PKKPVDFQVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLFQDHE
DLLGEFVHFLPDFRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDEYTEL
SDQREDGDENLVAYSAESLANQGQWPGYPKVEDTEGIQIYESNGGHERDPDIGSQKNLLS
TNHMAKAINELDLTDCAQCTPSYRRLPDDYPIQIPSYRNSLGEKVLNDHWVSVTSGSEDY
SFKHMRKNQYEESLFRCEDDRFELDMLLESVSAAIKRVESLLEKINNNTISIETPICIRE
HLSELNLRCIERLYGDYGLDVMDFLKKNSHIALPVILTRLKQKQEEWARCRADFRKVWAE
VYAKNHHKSLDHRSFYFKQQDSKNLSTKGLVAEIKDISERKHKEDLLRAIAVGTKPSFTP
DVEFIYTDTKVHTDLYKLIKYYCEEICATEQSDKVMKLWVTFLEPMFGVPSRSETIETMK
DVAKIEDNQEHHDASEAVKENTCDGSMASNLKPLTPPKMPNKENPMIQGSSFAQDLPVNT
GESIQQDKLHDVAAITNEDSQPSKLVSTRNDLIMEGVENRSRVSDVSMGGHKVEREEGEL
SPTESCEQENFEVYKENGLEPVQKLPDNEISNTDREPKEGACGTEAVTRSNALPEDDDNK
ITQKLSEGDENASKFIVSASKFGGQVSSDEEHKGAESENEAGGMVNSNEGEDGSFFTFSE
RYLQPVKPLAKHVPGTLQASECDTRNDSRVFYGNDSLYVLFRLHQMLYERIQSAKIHSER
KWKAPDSTSTDSYTRFMEALYNLLDGSSDNTKFEDECRAIIGAQSYVLFTLDKLVQKFVK
HLHAVAADETDTKLLQLYAYENYRKPGRFFDIVYHENARALLHDQNIYRIEYSSAQTRLG
IQLMNSWNDQPEVTAVTVEPGFANYLQNDFLSFVSDEEKPGLFLKRNKAKLSGPGEESLG
MSRALEGLNIINEVECKIACSSFKVKYEPHTADLLYRRKQKKATLNPTGPENVKTSDSSE
LSRKKRISRFHMSLNRRLVALP
NT seq 3489 nt   +upstreamnt  +downstreamnt
atgaagagggttagagaagaggtttacgttgaaccacaaatgcgaggacctactgtttcc
tctcgaggagaaacaaatggtaggccttcaacgattagtggcggaggaacaacgggaggg
ctaacaacagttgatgctttgacatatcttaaagctgtgaaggatatgtttcaagacaac
aaagagaaatatgagactttccttggagtcatgaaggacttcaaagctcagagagttgac
actaatggcgtcatagcaagagtaaaagatttgttcaagggctatgacgacttacttttg
ggttttaataccttcttacctaaggggtacaaaattacccttcagcctgaggatgagaaa
cctaagaagccagtggatttccaagtagctatcgaatttgtcaacaggattaaggcgcga
tttggaggtgatgaccgtgcatataaaaaatttctagacatcttgaacatgtatagaaag
gaaaccaagtccatcaacgaggtctatcaagaggttactctgttgttccaggaccatgaa
gatctgctcggggagtttgttcatttcttaccagattttcgaggatcagtttctgttaat
gaccctcttttccagaggaacacaataccgcgtgatagaaattctacatttcctggcatg
catccaaagcattttgagaagaaaataaaacggagtaggcatgatgagtatactgaactc
tctgatcaacgagaggatggtgatgagaaccttgtggcctactctgctgaatcccttgct
aatcaaggtcaatggccaggatatcctaaggtagaggacaccgaggggattcaaatttat
gaaagtaacgggggccatgaaagagatccagacatcggaagtcaaaaaaatctactgtct
acaaaccatatggccaaggcaataaatgaactggatcttactgactgtgcacaatgtaca
ccaagttatcgtcgcttgccagatgattatcctattcagattccaagctacagaaattca
cttggtgaaaaggtgcttaacgatcattgggtatctgtcacatcggggagtgaggattac
tcattcaaacacatgcgcaaaaatcagtatgaagaaagcttgtttcgatgtgaggatgat
aggtttgagttggacatgttactagagtctgtaagtgcagccatcaagcgtgtggaaagt
cttctggaaaagattaacaacaatacaatctctatagagacaccaatttgtattagagaa
cacttatcagagctgaacctaagatgcattgagcggttgtacggggattatgggcttgat
gtcatggattttctgaagaagaattctcatatcgccttacctgtgattctaacacgcttg
aagcagaaacaagaagaatgggctaggtgtcgcgctgatttcaggaaagtatgggctgaa
gtatatgctaagaatcatcacaaatcactcgatcatcgtagtttctatttcaagcagcag
gactccaagaatttaagcacaaaaggtttagtggcggagattaaagatatcagtgagaga
aagcataaagaagacctgcttcgtgccattgctgttggaactaagccctctttcacccca
gatgtggagttcatttatactgatacaaaagttcatactgacctatataagctaatcaag
tattattgtgaggaaatatgtgctactgaacagtcggataaagtaatgaagctatgggta
acctttttggagcccatgtttggcgttccttctaggtctgaaactattgagacaatgaaa
gatgttgcaaagatcgaagacaaccaagagcaccatgatgcaagtgaggcagtgaaggaa
aatacatgtgacggttctatggcctcaaaccttaaaccgttaacacctccaaaaatgcct
aacaaagaaaacccaatgatacaaggaagctcttttgcgcaagatttgccagtcaacaca
ggagaaagcattcagcaagataaactgcatgatgttgcagctataactaatgaggatagc
cagccttccaaactggtgtcaaccagaaacgatttgataatggagggtgtagagaatcgt
agtagggtcagtgatgtatcaatgggagggcataaggtcgagcgagaagagggtgaatta
tcccccactgaaagttgcgagcaagaaaatttcgaggtttataaagagaatgggctcgag
cctgtgcagaaactaccagataatgaaataagtaatacagaccgagaacccaaagagggt
gcatgtggtactgaagctgtaacaaggagcaatgccctccctgaagatgatgataataaa
ataactcaaaagttatcagaaggggatgaaaatgcctcgaaatttattgtctcagcaagc
aagtttggtggccaagtttcttccgatgaagagcataaaggagctgagagtgaaaatgag
gctggagggatggttaattccaacgagggtgaagatggatcctttttcacattttcagaa
cggtatctgcaacctgtaaagccccttgcaaagcatgtgcctgggacactgcaagcaagt
gaatgcgacacccggaatgattctcgagttttctatgggaatgattcactctatgtgctt
tttaggcttcatcaaatgttgtacgagagaatacaatcagcaaagatacattcagagagg
aaatggaaagctccagatagcacatctactgattcttataccaggttcatggaagccctt
tacaatttacttgatggctctagcgacaatacaaagtttgaagatgaatgtcgagctatt
atcggagcacaatcatatgttctcttcacattggacaagctagttcaaaagtttgttaag
catcttcacgcagtcgcagctgatgagacagacaccaagcttctgcagctatatgcatac
gagaactacagaaaaccaggaagattctttgatatagtgtaccatgagaatgctcgagcc
cttctccatgatcagaacatatacaggattgaatattcatctgcccaaacccgtctcgga
attcaacttatgaacagctggaatgatcagcctgaagttacagctgtaacagtggaacca
ggttttgctaattatctgcagaatgactttctttcgtttgtcagtgatgaagagaaaccc
ggactatttctgaaaaggaacaaggcaaaattaagtggtccgggtgaagaatctctaggg
atgtcacgtgccttggaaggattgaacattatcaatgaggttgaatgtaagatagcttgc
agttctttcaaggtcaagtatgaaccacacacagcagatcttttatatagaagaaagcag
aagaaagcaacactgaatccaactggacctgaaaatgttaaaacctctgatagtagtgaa
ctctcgagaaagaaacgaatatcgcgctttcacatgagtcttaaccgcagacttgtcgcc
ttgccttaa

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