Arabidopsis thaliana (thale cress): AT1G59890
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Entry
AT1G59890 CDS
T00041
Symbol
SNL5
Name
(RefSeq) SIN3-like 5
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ath03036
]
AT1G59890 (SNL5)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
AT1G59890 (SNL5)
REST complex
AT1G59890 (SNL5)
Heterochromatin formation proteins
Other heterochromatin formation proteins
AT1G59890 (SNL5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
Sin3_corepress
PAH
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
842283
NCBI-ProteinID:
NP_176197
TAIR:
AT1G59890
UniProt:
Q9XIE1
LinkDB
All DBs
Position
1:22043643..22051114
Genome browser
AA seq
1162 aa
AA seq
DB search
MKRVREEVYVEPQMRGPTVSSRGETNGRPSTISGGGTTGGLTTVDALTYLKAVKDMFQDN
KEKYETFLGVMKDFKAQRVDTNGVIARVKDLFKGYDDLLLGFNTFLPKGYKITLQPEDEK
PKKPVDFQVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLFQDHE
DLLGEFVHFLPDFRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDEYTEL
SDQREDGDENLVAYSAESLANQGQWPGYPKVEDTEGIQIYESNGGHERDPDIGSQKNLLS
TNHMAKAINELDLTDCAQCTPSYRRLPDDYPIQIPSYRNSLGEKVLNDHWVSVTSGSEDY
SFKHMRKNQYEESLFRCEDDRFELDMLLESVSAAIKRVESLLEKINNNTISIETPICIRE
HLSELNLRCIERLYGDYGLDVMDFLKKNSHIALPVILTRLKQKQEEWARCRADFRKVWAE
VYAKNHHKSLDHRSFYFKQQDSKNLSTKGLVAEIKDISERKHKEDLLRAIAVGTKPSFTP
DVEFIYTDTKVHTDLYKLIKYYCEEICATEQSDKVMKLWVTFLEPMFGVPSRSETIETMK
DVAKIEDNQEHHDASEAVKENTCDGSMASNLKPLTPPKMPNKENPMIQGSSFAQDLPVNT
GESIQQDKLHDVAAITNEDSQPSKLVSTRNDLIMEGVENRSRVSDVSMGGHKVEREEGEL
SPTESCEQENFEVYKENGLEPVQKLPDNEISNTDREPKEGACGTEAVTRSNALPEDDDNK
ITQKLSEGDENASKFIVSASKFGGQVSSDEEHKGAESENEAGGMVNSNEGEDGSFFTFSE
RYLQPVKPLAKHVPGTLQASECDTRNDSRVFYGNDSLYVLFRLHQMLYERIQSAKIHSER
KWKAPDSTSTDSYTRFMEALYNLLDGSSDNTKFEDECRAIIGAQSYVLFTLDKLVQKFVK
HLHAVAADETDTKLLQLYAYENYRKPGRFFDIVYHENARALLHDQNIYRIEYSSAQTRLG
IQLMNSWNDQPEVTAVTVEPGFANYLQNDFLSFVSDEEKPGLFLKRNKAKLSGPGEESLG
MSRALEGLNIINEVECKIACSSFKVKYEPHTADLLYRRKQKKATLNPTGPENVKTSDSSE
LSRKKRISRFHMSLNRRLVALP
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgaagagggttagagaagaggtttacgttgaaccacaaatgcgaggacctactgtttcc
tctcgaggagaaacaaatggtaggccttcaacgattagtggcggaggaacaacgggaggg
ctaacaacagttgatgctttgacatatcttaaagctgtgaaggatatgtttcaagacaac
aaagagaaatatgagactttccttggagtcatgaaggacttcaaagctcagagagttgac
actaatggcgtcatagcaagagtaaaagatttgttcaagggctatgacgacttacttttg
ggttttaataccttcttacctaaggggtacaaaattacccttcagcctgaggatgagaaa
cctaagaagccagtggatttccaagtagctatcgaatttgtcaacaggattaaggcgcga
tttggaggtgatgaccgtgcatataaaaaatttctagacatcttgaacatgtatagaaag
gaaaccaagtccatcaacgaggtctatcaagaggttactctgttgttccaggaccatgaa
gatctgctcggggagtttgttcatttcttaccagattttcgaggatcagtttctgttaat
gaccctcttttccagaggaacacaataccgcgtgatagaaattctacatttcctggcatg
catccaaagcattttgagaagaaaataaaacggagtaggcatgatgagtatactgaactc
tctgatcaacgagaggatggtgatgagaaccttgtggcctactctgctgaatcccttgct
aatcaaggtcaatggccaggatatcctaaggtagaggacaccgaggggattcaaatttat
gaaagtaacgggggccatgaaagagatccagacatcggaagtcaaaaaaatctactgtct
acaaaccatatggccaaggcaataaatgaactggatcttactgactgtgcacaatgtaca
ccaagttatcgtcgcttgccagatgattatcctattcagattccaagctacagaaattca
cttggtgaaaaggtgcttaacgatcattgggtatctgtcacatcggggagtgaggattac
tcattcaaacacatgcgcaaaaatcagtatgaagaaagcttgtttcgatgtgaggatgat
aggtttgagttggacatgttactagagtctgtaagtgcagccatcaagcgtgtggaaagt
cttctggaaaagattaacaacaatacaatctctatagagacaccaatttgtattagagaa
cacttatcagagctgaacctaagatgcattgagcggttgtacggggattatgggcttgat
gtcatggattttctgaagaagaattctcatatcgccttacctgtgattctaacacgcttg
aagcagaaacaagaagaatgggctaggtgtcgcgctgatttcaggaaagtatgggctgaa
gtatatgctaagaatcatcacaaatcactcgatcatcgtagtttctatttcaagcagcag
gactccaagaatttaagcacaaaaggtttagtggcggagattaaagatatcagtgagaga
aagcataaagaagacctgcttcgtgccattgctgttggaactaagccctctttcacccca
gatgtggagttcatttatactgatacaaaagttcatactgacctatataagctaatcaag
tattattgtgaggaaatatgtgctactgaacagtcggataaagtaatgaagctatgggta
acctttttggagcccatgtttggcgttccttctaggtctgaaactattgagacaatgaaa
gatgttgcaaagatcgaagacaaccaagagcaccatgatgcaagtgaggcagtgaaggaa
aatacatgtgacggttctatggcctcaaaccttaaaccgttaacacctccaaaaatgcct
aacaaagaaaacccaatgatacaaggaagctcttttgcgcaagatttgccagtcaacaca
ggagaaagcattcagcaagataaactgcatgatgttgcagctataactaatgaggatagc
cagccttccaaactggtgtcaaccagaaacgatttgataatggagggtgtagagaatcgt
agtagggtcagtgatgtatcaatgggagggcataaggtcgagcgagaagagggtgaatta
tcccccactgaaagttgcgagcaagaaaatttcgaggtttataaagagaatgggctcgag
cctgtgcagaaactaccagataatgaaataagtaatacagaccgagaacccaaagagggt
gcatgtggtactgaagctgtaacaaggagcaatgccctccctgaagatgatgataataaa
ataactcaaaagttatcagaaggggatgaaaatgcctcgaaatttattgtctcagcaagc
aagtttggtggccaagtttcttccgatgaagagcataaaggagctgagagtgaaaatgag
gctggagggatggttaattccaacgagggtgaagatggatcctttttcacattttcagaa
cggtatctgcaacctgtaaagccccttgcaaagcatgtgcctgggacactgcaagcaagt
gaatgcgacacccggaatgattctcgagttttctatgggaatgattcactctatgtgctt
tttaggcttcatcaaatgttgtacgagagaatacaatcagcaaagatacattcagagagg
aaatggaaagctccagatagcacatctactgattcttataccaggttcatggaagccctt
tacaatttacttgatggctctagcgacaatacaaagtttgaagatgaatgtcgagctatt
atcggagcacaatcatatgttctcttcacattggacaagctagttcaaaagtttgttaag
catcttcacgcagtcgcagctgatgagacagacaccaagcttctgcagctatatgcatac
gagaactacagaaaaccaggaagattctttgatatagtgtaccatgagaatgctcgagcc
cttctccatgatcagaacatatacaggattgaatattcatctgcccaaacccgtctcgga
attcaacttatgaacagctggaatgatcagcctgaagttacagctgtaacagtggaacca
ggttttgctaattatctgcagaatgactttctttcgtttgtcagtgatgaagagaaaccc
ggactatttctgaaaaggaacaaggcaaaattaagtggtccgggtgaagaatctctaggg
atgtcacgtgccttggaaggattgaacattatcaatgaggttgaatgtaagatagcttgc
agttctttcaaggtcaagtatgaaccacacacagcagatcttttatatagaagaaagcag
aagaaagcaacactgaatccaactggacctgaaaatgttaaaacctctgatagtagtgaa
ctctcgagaaagaaacgaatatcgcgctttcacatgagtcttaaccgcagacttgtcgcc
ttgccttaa
DBGET
integrated database retrieval system