Arabidopsis thaliana (thale cress): AT1G60200
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Entry
AT1G60200 CDS
T00041
Name
(RefSeq) splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein
KO
K12822
RNA-binding protein 25
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT1G60200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT1G60200
Spliceosome [BR:
ath03041
]
Complex A
U1 snRNP components
U1 related factors
AT1G60200
Complex B
AT1G60200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
842315
NCBI-ProteinID:
NP_176226
TAIR:
AT1G60200
UniProt:
Q8VY15
A0A654EJK6
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All DBs
Position
1:complement(22200694..22205400)
Genome browser
AA seq
899 aa
AA seq
DB search
MADESSSPATGDPNSQKPESTTPISIPNPNPNPSLTPPPPQQHSQPPVAPLVPPGPPYAP
PAQIPSSLLPTNLPPPPPFRPGMQFTPVANFQNPSSGVPPPGSMPQYQPQPGMRPFQPMA
NGYPGIHGVAPPGAMPPHGLLRYPSPYPTMVRPGFIMRPPGTIGAVQLAPRPLIPGMPGL
RPVMPPMVRPASLPFVTPAEKPQTTIYIGKIATVENDFMMSILEFCGHVKSCLRAEDPTT
KKPKGFGFYEFESAEGILRAIRLLTQRTIDGQELLVNVNQATKEYLLKYVEKKIETAKKA
KESQGTKENQAEGPESEQDKLESADNETGKDGESKIKENIDIANSAVLTDEEREADREAM
EKIETAIEERLKSNPLPPPPPPPADGSGMEFAFKSKDGDSNTDVARSDAAANDVETSGEH
NRPDTSSPDWSKRNDRRSRERGEKEQEMDRYEREAERERSRKEREQRRKLEDAERAYQTR
LRQWERREREKEKERQYEKEKEKEKERKRKKEIRYEEEEEEDDDDSRRRWHRAALDERRR
RQLREKEDDLADRLKEEEEVAEAKRSAEEQNLQQQQLDALRILSGQAAIGSETVQTSPIE
NDHKATLQTVGESANEHHAADFEENGSGNESMAIDNNSGSEAHAPSKKLGFGLVGSGKRT
SVPSVFYEEDEDEARKAKKMKPLVPIDYSTEEQEAVAHGGSGNTPPHLALAAEFAKRISS
TNPKEETIETEKQRSRRSHDKASHRDRERERERDRDRDRVRDRGDGHSGPTKDAKESGKA
KIIDTKFLDAKQLIDTIPKTKEDLFSYEINWAMYDKHQVHERMRPWISKKIMEFLGEEEA
TLVDFIVSNTQQHVQASQMLELLQSILDEEAEMFVLKMWRMLIFEIKRVEAGVPVKSKA
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaatcttcttctccggccacgggggatcccaattcacagaaaccagaatcc
actactccgatttcaattcccaatccaaatcccaatccttcactaacaccaccgccgcct
caacaacattcgcaaccaccagtcgctcctctggttccacctggtccgccttatgctcct
ccggctcagattcctagctcgcttctccccaccaatctcccgccgccaccaccattccgt
cccggtatgcagttcactcccgttgcgaattttcaaaaccctagctctggagttcctcct
ccaggatctatgcctcagtatcaaccgcagcctggtatgagacctttccagcctatggct
aatggttatcccggaattcatggtgttgctcctcctggtgccatgcctcctcatgggctt
ctccggtatccttctccatatccaacaatggttcgtcctggattcattatgcggccgcct
ggtacaatcggtgctgttcaactagcaccacgaccccttattccaggaatgcctggtctc
cgtcctgtaatgcctcctatggttagaccggcttctcttccttttgtaacacctgcagaa
aagccccagaccacaatttacattggcaagatagctaccgtggaaaatgactttatgatg
tctattcttgagttttgtggccatgtcaaaagctgtttacgtgcggaagatcctaccacc
aagaaacctaaaggttttggattctatgaatttgaatcagctgaagggattctccgcgca
atacgcctgctgacccaacgtactatagatggacaagagcttttggtgaatgttaatcaa
gcaacaaaggagtatttgctaaaatatgttgagaagaaaatagagactgcaaagaaagcc
aaggaaagtcaaggaaccaaagagaaccaagctgaaggtcctgagagtgagcaagacaag
cttgagagtgctgataatgagacagggaaggatggagaatcgaagattaaagaaaacatc
gatattgcgaattctgctgtcctaactgatgaagaaagggaagcagacagagaggctatg
gaaaagattgaaactgctattgaagaaaggttaaagtccaaccctttgcctcctccacca
ccaccacctgctgatggttcaggcatggaatttgctttcaaatctaaggatggtgactcc
aacactgacgtagctaggagtgatgccgcagcaaatgatgttgagacttctggagaacac
aataggcctgacacaagctcacctgattggagtaagagaaatgaccgaagaagcagagaa
agaggtgagaaggagcaagaaatggatagatacgagagggaggctgaaagagaacggtca
aggaaagagagagagcaaaggaggaaacttgaggatgcagagcgtgcttaccagactcgt
cttcgacaatgggaacgaagagaaagagaaaaggagaaggaacgacagtacgagaaggag
aaagagaaagagaaagagcgcaagaggaaaaaggaaatccgctatgaggaagaagaggaa
gaagacgatgatgattcaagaagaagatggcatagggctgcattagatgagagaagaaga
cgacaactaagagaaaaggaggatgacttagctgatagattgaaagaagaggaagaggtt
gctgaggcgaagaggagtgccgaggagcaaaatttgcagcaacagcaattagatgcctta
agaatcctatcgggacaggcagctattggaagcgaaacggttcagacatcacctattgaa
aatgatcacaaggcaactctccaaactgtcggtgaatctgccaatgagcaccatgcagca
gattttgaagaaaatggttctggtaatgaatcgatggctatcgataataatagtggatca
gaggcacatgctccctcaaagaaattaggatttgggcttgtgggatccggaaagcgaact
tctgtgccttctgttttctatgaggaggatgaagatgaagcacgtaaggctaaaaagatg
aaacctttggttcctatagattactcaaccgaggaacaagaggctgtggcccatggtggc
tcagggaatacaccacctcatttggctttagccgctgaatttgcaaaacgaatttcgagt
accaatcccaaggaagagacgatagaaaccgaaaaacaaaggagcagacgttctcatgat
aaggcaagccaccgggacagggaaagggaaagggaaagggacagggacagggatagagtc
agggaccgaggtgacgggcatagtggtcccaccaaagacgccaaagagtctggaaaagca
aagataattgatactaagtttctggatgcgaaacaattgatagatacaatcccaaagaca
aaggaagatttattttcttacgagataaactgggctatgtatgacaagcaccaagtgcac
gaaagaatgagaccatggatctcaaagaaaattatggagtttctcggagaagaggaagcc
actctggtagatttcatcgtgtcaaacactcaacaacacgtgcaggcgtctcagatgctt
gagctgttgcaatcaattctagacgaagaagctgagatgtttgtgctgaagatgtggaga
atgctcatctttgagatcaagcgggttgaagctggagtcccggtaaaatccaaagcctga
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