KEGG   Arabidopsis thaliana (thale cress): AT1G60360
Entry
AT1G60360         CDS       T00041                                 
Name
(RefSeq) RING/U-box superfamily protein
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT1G60360
   04121 Ubiquitin system [BR:ath04121]
    AT1G60360
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     AT1G60360
Membrane trafficking [BR:ath04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    AT1G60360
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    AT1G60360
SSDB
Motif
Pfam: zf-RING_2 Zn_ribbon_19 zf-C3HC4_2 zf-RING_11 zf-rbx1 zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-ANAPC11 zf-RING-like FAR1_N zf-RING_Vps41 zf-RING_16 Prok-RING_4 zf-RING_10 DmmA-like_C
Other DBs
NCBI-GeneID: 842331
NCBI-ProteinID: NP_176239
TAIR: AT1G60360
UniProt: O80757
LinkDB
Position
1:complement(22242531..22243760)
AA seq 327 aa
MSLSQPITRTDSAPNGAFRTFGLYWCYHCDRMVRIASSNPSEIACPRCLRQFVVEIETRQ
RPRFTFNHATPPFDASPEARLLEALSLMFEPATIGRFGADPFLRARSRNILEPESRPRPQ
HRRRHSLDNVNNGGLPLPRRTYVILRPNNPTSPLGNIIAPPNQAPPRHVNSHDYFTGASS
LEQLIEQLTQDDRPGPPPASEPTINSLPSVKITPQHLTNDMSQCTVCMEEFIVGGDATEL
PCKHIYHKDCIVPWLRLNNSCPICRRDLPLVNTVAESRERSNPIRQDMPERRRPRWMQLG
NIWPFRARYQRVSPEETANQNPRDNRS
NT seq 984 nt   +upstreamnt  +downstreamnt
atgtcattgagtcagccaataacacggaccgatagtgcacccaatggagcatttaggact
tttggtctctactggtgctaccattgtgatcgtatggtcagaattgcatcctctaaccca
tcagagatcgcctgtcctcgatgtttgaggcaatttgtcgttgagattgaaacgagacaa
cggcctcggtttactttcaaccatgctactccgccttttgatgcttctcctgaggctcgt
cttctcgaagctctctcgctcatgtttgagcctgcaaccataggtaggtttggtgcagac
ccatttcttagggcaagatccagaaacatcttggaacctgaatcaagaccccgaccgcaa
catcgaagacgacacagccttgacaatgttaacaatggtggtttacctctaccaagaaga
acatatgttattctccggcccaataatccgactagtccactcggaaacataattgcgcca
ccaaatcaagcaccaccacggcatgtgaactcacatgattactttactggagcatcaagc
ttagagcagctgattgaacaactaacacaagacgataggcctggaccaccacctgcgtca
gaacccaccattaattccctaccatctgtgaaaataacaccacaacatctaactaacgac
atgtcccaatgcacagtgtgcatggaagaattcattgttggtggggacgcaacggaatta
ccatgtaaacatatttaccataaagattgtatagtcccgtggcttaggcttaacaattct
tgccctatctgccgccgtgacctgccacttgtcaacaccgttgctgaatctcgagaaagg
agcaatcctattagacaagacatgcctgaaagaaggcgtccaaggtggatgcaactcggt
aacatttggccatttagagcaagataccaaagggttagtccagaagaaacagcaaaccag
aatcctcgagataacaggagctaa

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