KEGG   Arabidopsis thaliana (thale cress): AT1G63160
Entry
AT1G63160         CDS       T00041                                 
Symbol
RFC2
Name
(RefSeq) replication factor C 2
  KO
K10755  replication factor C subunit 2/4
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03030  DNA replication
ath03410  Base excision repair
ath03420  Nucleotide excision repair
ath03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AT1G63160 (RFC2)
   03410 Base excision repair
    AT1G63160 (RFC2)
   03420 Nucleotide excision repair
    AT1G63160 (RFC2)
   03430 Mismatch repair
    AT1G63160 (RFC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ath03032]
    AT1G63160 (RFC2)
   03036 Chromosome and associated proteins [BR:ath03036]
    AT1G63160 (RFC2)
   03400 DNA repair and recombination proteins [BR:ath03400]
    AT1G63160 (RFC2)
DNA replication proteins [BR:ath03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    AT1G63160 (RFC2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    AT1G63160 (RFC2)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    AT1G63160 (RFC2)
DNA repair and recombination proteins [BR:ath03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     AT1G63160 (RFC2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    AT1G63160 (RFC2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 Rad17 AAA_22 AAA_16 Mg_chelatase Viral_helicase1 nSTAND3 AAA_11 AAA_5 RuvB_N AAA_19 AAA_24 AAA_assoc_2 AAA_28 RCF1-5-like_lid AAA_30 RNA_helicase AAA_18 MeaB AAA_25 bpMoxR DNAX_ATPase_lid KTI12 ABC_tran AAA_7 NTPase_1 IstB_IS21 AAA_3 T2SSE NPHP3_N SLFN-g3_helicase DO-GTPase1 SRP54
Other DBs
NCBI-GeneID: 842620
NCBI-ProteinID: NP_176504
TAIR: AT1G63160
UniProt: Q9CAM7 A0A178WFQ7
LinkDB
Position
1:complement(23421834..23423914)
AA seq 333 aa
MASSSSTSTGDGYNEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTG
KTTSILALAHELLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILD
EADSMTSGAQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGR
LLVVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFSFVNQENVFKVCDQPHPL
HVKNIVRNVLESKFDIACDGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETG
FAHMRICDGVGSYLQLCGLLAKLSIVRETAKAP
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggcgtcttcttcatcaacctctaccggtgacggatacaatgaaccatgggtggagaaa
tacaggccgagcaaagtagtcgatatcgttggaaacgaagacgccgtctccagacttcaa
gtcattgctcgcgacggcaacatgcctaatcttatcctttccggtcctcctggaacaggt
aaaaccacaagcattttggctcttgctcatgagctccttggcacgaattacaaggaggct
gttctggagttgaatgcatctgatgataggggtattgatgttgtaaggaacaaaattaag
atgtttgcgcagaagaaagtaacacttcctccagggcgtcataaggttgttatcctagat
gaagctgacagtatgacatctggagcacaacaagcattgaggagaacgattgaaatctat
tcgaactctacgcggtttgcacttgcttgtaatacatcagccaagattattgagcccatt
cagagtagatgtgccttagttcgattctctagattatctgatcagcagatactaggccgt
ctcttggtggtggttgcagcagagaaagttccgtatgtgcctgaaggccttgaggcgata
atctttacagctgatggtgacatgaggcaagctctgaacaacttgcaagccacattcagc
gggttttcgtttgtcaaccaagaaaacgtcttcaaggtctgtgaccagcctcacccgctt
catgtcaagaacattgttcgcaatgtgttggaaagtaagtttgacatcgcctgtgacggc
ttaaagcagctctatgatttgggctactctccaaccgacattatcacaacgcttttccgt
ataataaagaattacgatatggctgagtatctgaaacttgagttcatgaaggaaactgga
tttgcgcatatgagaatctgtgatggagttggatcttatcttcagctatgtggtcttctg
gctaagttatccattgttcgtgaaacagcgaaagcaccttaa

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