Arabidopsis thaliana (thale cress): AT1G63210
Help
Entry
AT1G63210 CDS
T00041
Name
(RefSeq) Transcription elongation factor Spt6
KO
K11292
transcription elongation factor SPT6
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT1G63210
03036 Chromosome and associated proteins [BR:
ath03036
]
AT1G63210
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
AT1G63210
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
AT1G63210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
Tex_central_region
Spt6_S1
HHH_9
HHH_3
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
842626
NCBI-ProteinID:
NP_176510
TAIR:
AT1G63210
UniProt:
Q9CAM1
LinkDB
All DBs
Position
1:23443688..23447354
Genome browser
AA seq
1197 aa
AA seq
DB search
MRRKKMKYKQGTDSNALRYANDVFGDPEELLKLRKKDLKYNEKIERKLEDEFEPMVLSEK
YMTEKDDEIRKLDVPERMQIFEEAIGIVSLDDMSIQEESNWIYARLLQEQGQGCLINKDD
IVKFLEMFHVQKLEIPFIAMYRKEQCRSLLDSSDDDHDGSDFNLDKKLETKWHKVLWMIQ
DLDRKWVLLRKRKTALFGYYTKRFEEETCMSDLNKSLFESVIKSLQAAETEREVDDVDSK
FNLHFPHCEIDEGQYKRPNRKSQYSICSKFGIKEFANKFGYSAEQLGLALSLEKVFVDEL
EDAKKTPEEMALNYECAMFGDSQAVLKGARHMAAVEISCEPSIRKYVRGIFMENAVVSTS
PTPDGNVVIDSFHRFSAVKWLSEKPLRKFDGVQWLLIQKAEEEKLLQVTFKLPENQMNRI
ISECSEHYLSVGVSKYAQLWNEQRKLILEDAVHGFVLPSMEKEARSLLTSRAKTQLLSEY
GQVLWNKVSSGPYRRNNNTSEEEAAPRVLACCWGPGNPETTFVMLDSSGELVDVLYSGSI
GLRSRDVNDQKRKKMDQDRFLKFIRDHQPDVLALAAVNLSCVRLKDEIYEAIFQMVEELP
LNYVDDRIYDFPLVYADESLPRLYENSRISSEQLPQQAGIVKRAVSLGRYLQNPLAMIST
LCGPGRDILSWKLHSFQDFLDPDEKYEMVEQVMVDITNQVGIDINLAASHEWLFSPLQFV
SGLGPRKAASLQKSLVRAGSIFVRKELINHGIGKKVFVNAAGFLRIRRSGLACSSSQFID
LLDDTRIHPESYGLAQELAKDVYAHDTVRGDEDDAIEMAIEHVRDEPASLRKIVLDEYLR
SKNQENKKETYSLIMRELSCGFQDWRSLFKEVDSDEEFYMISGETKETIGEGRIVQATVK
KVTSGKAKCVLDCGLPGILLKEDYSDDGRDIVDLSNKLCEGDIVTCKVKSILKQRYHVLL
VCKESEMRKHRNLGDVDDYYHEEKRNSVLIEKEKVPKEKKQFKSRMIVHPRFQNITAEQA
TVYLSDKNIGESIVRPSSRGLNHLTLMIKISDNVYANKEIIEGEKENKDIVSLQRIGKTL
KIGNETFEDLDEVMDRYVDPLVTHLMTMLNHRKFRTGTKSEIDDLLRVEKGVNPKMVVYS
FGVSHEHPGSFILSYIRSANPHHEYIGLYPKGFKFRKRMFGDLDKLAAYFKRHIDNQ
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggaagaaaatgaaatataagcaaggaactgattcgaacgctttacgatacgct
aatgatgtatttggtgatcctgaagaattgttgaaacttcggaaaaaggatttgaagtat
aacgaaaagatcgaaagaaagttagaagatgagtttgaaccaatggttctctctgagaag
tatatgacggagaaagatgatgaaattaggaagcttgatgttcctgagagaatgcagata
tttgaagaagccattggaattgtttccctagatgacatgagcattcaagaagagagcaac
tggatttatgctcgattgcttcaagaacaagggcagggttgtttgattaataaggatgac
attgtgaagtttttagagatgtttcatgtgcagaagttagagataccgtttatagctatg
tatcggaaggagcagtgtcggagtttattggacagttctgatgatgatcatgatggtagt
gatttcaatcttgacaagaagcttgagaccaagtggcataaagtcttgtggatgattcaa
gatttggatagaaagtgggttcttctgcggaaaaggaaaaccgcgttgtttggttactat
accaaacgttttgaagaagaaacctgcatgtctgatctgaataagagtctttttgaatct
gttattaagtctcttcaagcggcggagacagagagagaagttgatgatgtagactcaaag
ttcaacttgcattttcctcattgtgagatcgatgaaggacagtacaagaggccgaatagg
aaatcgcaatatagcatctgcagcaaatttgggattaaggaatttgcaaacaagtttggt
tatagcgctgagcaattgggactagcgttgtctcttgagaaagtttttgttgatgagctt
gaagatgcaaagaaaacaccagaggagatggcattgaactatgagtgtgcaatgtttgga
gattctcaagctgttcttaaaggtgcaaggcatatggctgcggttgagataagctgcgag
ccatcgattagaaagtatgttcgtggaatttttatggagaatgcagtagtctcaacgagt
ccaacaccagatgggaatgtggttatagattccttccatcggttttctgcggttaagtgg
ttaagcgagaagccattgagaaagtttgatggtgtacaatggcttctcattcagaaagca
gaagaggagaagcttcttcaagtaactttcaagctgcctgagaatcagatgaataggata
attagtgaatgcagtgaacactatctaagtgttggtgttagtaagtatgctcaactctgg
aacgagcagaggaaattgatactggaggatgcggttcatggttttgttttgccgtcaatg
gagaaagaagcaagatccttgctaactagcagagcgaagactcagttgctttcagagtat
ggacaggttttatggaacaaagtgtcttcagggccatatcgaaggaataataatacctcg
gaggaggaagctgcaccgagggtcctagcttgttgttggggacctggaaatccagaaact
acatttgtgatgcttgattcatcaggagagctggttgatgtgctttactcaggttccatt
ggattgcggtctcgggatgtaaatgaccagaaacgtaaaaaaatggatcaagatcgtttt
ctaaagtttataagagaccatcaaccagatgttttggctttagcagctgttaatttgagt
tgtgtacgcctgaaggatgagatttatgaggctatattccaaatggtggaagagctgccg
ttgaattatgtagatgataggatttatgattttccattggtttatgcggatgaatctctt
cctaggctatacgaaaattctagaatctcaagtgaacaactacctcaacaagcaggaatt
gtgaaacgcgcagtttctcttggacgttatctccagaatccattagcaatgatctcaact
ttatgcggtccaggtagagatattctgtcttggaagcttcattcttttcaagattttctt
gatccagatgagaagtatgagatggttgaacaagttatggttgacataacgaatcaagtt
ggaatcgacattaatctggctgcgagccatgaatggcttttttctcctttacagtttgtt
tcaggtcttggtcctaggaaagctgcatctttgcagaagtctcttgttagagctggttcg
atatttgtccgcaaggaactgataaatcatgggattggtaaaaaggtattcgtaaatgca
gctggtttcttacggattcgtaggagcgggttggcttgtagtagcagccaatttattgat
ctgttggatgacactagaatacatcccgaatcatacggtcttgcgcaagaattggcgaaa
gatgtttatgctcatgatactgtaagaggtgatgaggatgatgcaatagagatggcgata
gagcatgtgagagatgagccagcttctttgaggaaaatcgttcttgatgagtacttgaga
agcaagaaccaagagaataagaaggaaacttatagtctgatcatgagagaattaagctgt
ggatttcaggattggcggagtctgtttaaagaggttgattcagatgaggagttttatatg
atttcaggtgaaaccaaagaaactattggtgaagggaggattgtgcaggccactgttaag
aaagtgacaagtggtaaagccaaatgtgtattagattgtggattacctgggattctcttg
aaggaagattactcagatgatggtagagatatcgttgatttgtctaacaaactgtgtgaa
ggcgatatcgttacttgcaaggtcaaatcgattctaaagcaaaggtatcatgtgttactt
gtctgcaaagaaagcgaaatgagaaagcacaggaatctcggggatgtcgatgattattac
cacgaggagaaacgaaatagtgtcctgatagagaaagagaaagttcctaaagaaaagaag
cagtttaagtctcggatgattgttcatcctcggtttcagaacatcactgccgagcaagca
acagtgtatttgtctgataagaatattggagaaagcattgttcgtccaagctcacgagga
ctgaatcatttgactttgatgatcaagatttctgataatgtgtatgctaacaaggagata
atcgaaggtgagaaggagaacaaagatatagtgagcttacaacgtattgggaaaacactg
aaaattgggaatgaaaccttcgaggatctagatgaggtaatggatcggtatgttgatcct
ttggtaactcatcttatgacaatgctaaaccaccggaaatttcggactgggacaaaatcg
gaaatagatgatcttcttcgggttgagaagggtgtgaatccgaaaatggtagtttacagt
tttggtgtttctcatgaacatccagggagctttatattgtcttacatacgatccgcaaat
ccgcaccacgagtacatcggtctataccctaagggattcaagttcaggaaaagaatgttt
ggggatcttgataaactggctgcttatttcaagagacatatcgataatcaatga
DBGET
integrated database retrieval system
