Arabidopsis thaliana (thale cress): AT1G66040
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Entry
AT1G66040 CDS
T00041
Symbol
VIM4
Name
(RefSeq) Zinc finger (C3HC4-type RING finger) family protein
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT1G66040 (VIM4)
03036 Chromosome and associated proteins [BR:
ath03036
]
AT1G66040 (VIM4)
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT1G66040 (VIM4)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
AT1G66040 (VIM4)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
AT1G66040 (VIM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-RING_5
PHD
RING_XB3-XBAT31
PHDvar_NSD
TRAF3_RING
zf-RING_10
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
842917
NCBI-ProteinID:
NP_176778
TAIR:
AT1G66040
UniProt:
Q9C8E1
A0A7G2E6T4
LinkDB
All DBs
Position
1:complement(24583740..24586760)
Genome browser
AA seq
622 aa
AA seq
DB search
MAIQTQLPCDGDGVCMRCQVTPPSEETLTCGTCVTPWHVSCLLPESLASSTGDWECPDCS
GVVVPSAAPGTGISGPESSGSVLVAAIRAIQADVTLTEAEKAKKRQRLMSGGGDDGVDDE
EKKKLEIFCSICIQLPERPVTTPCGHNFCLKCFEKWAVGQGKLTCMICRSKIPRHVAKNP
RINLALVSAIRLANVTKCSGEATAAKVHHIIRNQDRPDKAFTTERAVKTGKANAASGKFF
VTIPRDHFGPIPAANDVTRNQGVLVGESWEDRQECRQWGVHFPHVAGIAGQAAVGAQSVA
LSGGYDDDEDHGEWFLYTGSGGRDLSGNKRVNKIQSSDQAFKNMNEALRLSCKMGYPVRV
VRSWKEKRSAYAPAEGVRYDGVYRIEKCWSNVGVQGLHKMCRYLFVRCDNEPAPWTSDEH
GDRPRPLPDVPELENATDLFVRKESPSWGFDEAEGRWKWMKSPPVSRMALDTEERKKNKR
AKKGNNAMKARLLKEFSCQICRKVLSLPVTTPCAHNFCKACLEAKFAGITQLRDRSNGVR
KLRAKKNIMTCPCCTTDLSEFLQNPQVNREMMEIIENFKKSEEEAEVAESSNISEEEEEE
SEPPTKKIKMDNNSVGDTSLSA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcgattcaaactcagcttccttgcgacggagacggtgtatgtatgcggtgccaggtg
acacctccgtcagaagagactctcacgtgtggcacctgtgtcactccatggcacgtgtcg
tgtctccttcctgaatcactcgcttcttccactggagattgggagtgtcccgattgctcc
ggcgttgtcgttccctccgccgctccgggtaccggaatctccggacctgaatcttccggt
tcagttctcgttgctgcgatccgtgcgattcaggctgatgtgactttgaccgaagctgag
aaagccaaaaagaggcagagactgatgagtggtggtggtgacgatggtgtcgatgatgaa
gaaaagaagaagttagaaatcttttgttctatttgcattcaattgccagagagacctgtc
acgacaccgtgtgggcacaatttctgtttgaaatgtttcgagaaatgggcagtaggtcaa
gggaagctaacttgtatgatatgccgaagcaaaattccgagacatgtggcgaaaaatcct
cgcatcaacttagctctagtttctgctattcgtttagcaaatgttaccaaatgttctggt
gaggcaactgcggccaaggttcatcatattatccgcaaccaagaccgtcctgacaaagca
tttactaccgagcgggcagtaaaaactgggaaagctaatgctgctagcggtaagtttttt
gtgacaatacctcgtgatcattttggtcccataccagctgcgaatgatgtcactagaaac
caaggtgttttggttggagaatcttgggaggacaggcaagagtgtaggcagtggggagtt
catttcccgcatgttgctggcattgccgggcaagcagcggttggagctcagtctgtggcc
ctctctggaggttatgacgatgatgaggatcatggtgaatggtttctctacacaggaagt
ggtggaagggatctcagtggaaacaaaagagttaacaagatacagtcttctgaccaggcg
tttaaaaacatgaatgaagctctaagacttagttgcaaaatgggctatcctgtccgagtt
gtaaggtcttggaaggagaagcgttctgcatatgcccctgcggaaggagtgagatacgat
ggggtctacagaattgaaaagtgctggagtaatgttggcgtacagggtttgcataagatg
tgtcgttacctgtttgttagatgtgacaatgagccagctccatggaccagtgatgagcat
ggcgatcgtccaagacctttgcctgatgttccagagctggagaatgctactgacctgttt
gtgagaaaggagagtccatcatggggtttcgatgaagctgagggtcgttggaagtggatg
aagtctccacctgttagcagaatggctttggatactgaggagaggaagaagaataagaga
gcaaaaaaaggaaataatgctatgaaggccagacttctgaaagaattcagttgccaaatc
tgtcggaaagtgctgagtcttccagtgacgacaccttgtgcacacaacttctgcaaagca
tgcttagaagcgaagtttgctgggataactcaactgagagacagaagcaatggcgtgcgt
aaactacgtgcaaagaaaaacatcatgacctgcccttgctgcacaaccgatctctccgag
tttctccaaaacccgcaggtgaacagagaaatgatggagataatagagaattttaagaag
agtgaggaagaggctgaagttgcggagtcatcaaacatttctgaagaagaagaagaagaa
tccgaacctccaactaagaagattaagatggataacaactctgttggtgatacaagtctc
tcagcttaa
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integrated database retrieval system
