Arabidopsis thaliana (thale cress): AT1G66260
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Entry
AT1G66260 CDS
T00041
Name
(RefSeq) RNA-binding (RRM/RBD/RNP motifs) family protein
KO
K12881
THO complex subunit 4
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03013
Nucleocytoplasmic transport
ath03015
mRNA surveillance pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT1G66260
09122 Translation
03013 Nucleocytoplasmic transport
AT1G66260
03015 mRNA surveillance pathway
AT1G66260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT1G66260
03041 Spliceosome [BR:
ath03041
]
AT1G66260
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
AT1G66260
TREX complex
AT1G66260
Spliceosome [BR:
ath03041
]
Complex C
Other components
EJC/TREX
AT1G66260
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
AT1G66260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
842943
NCBI-ProteinID:
NP_564871
TAIR:
AT1G66260
UniProt:
Q94EH8
LinkDB
All DBs
Position
1:complement(24695637..24698914)
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AA seq
295 aa
AA seq
DB search
MSDALNMTLDEIVKKSKSERSAAARSGGKGVSRKSGRGRGGPNGVVGGGRGGGPVRRGPL
AVNTRPSSSFSINKLARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGVTN
EDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMKLE
ILGGNTESAPVAARVNVTGLNGRMKRSVFIGQGVRGGRVGRGRGSGPSGRRLPLQQNQQG
GVTAGRGGFRGRGRGNGGGRGNKSGGRGGKKPVEKSAADLDKDLESYHAEAMNIS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgctttgaatatgactcttgatgaaattgtgaagaagagtaagagtgaaagg
tctgcagctgcaaggtctggaggtaaaggagtttcccgtaagagtggacgtggacgtggt
ggacctaatggtgttgtaggaggtggaagaggaggtggacctgttcgtagaggtcctctt
gctgttaatactcggccatcatcatccttctccataaacaagcttgcccgcaggaagagg
agcttgccatggcagaatcagaatgatttgtatgaagaaacccttagagctgttggggta
tcaggagtggaagtcggaaccacagtttatattaccaaccttgatcagggagtgacaaat
gaagatataagggaactctatgctgaaattggagagctgaaaagatatgcaattcactat
gacaaaaatgggcgtccaagtggatcggctgaagttgtgtatatgagaagaagtgatgca
attcaagctatgaggaaatacaataatgtacttttggatggaaggcctatgaaactggag
attctgggtggaaatactgaatctgctcctgtcgcagctcgtgttaatgtgactggattg
aatggaaggatgaagaggagtgtcttcattggacaaggagttagaggtgggagagtagga
agaggaagaggttcaggtccttctgggagacgccttccactccaacaaaaccaacaaggt
ggtgtgacagctggtcgaggcgggttccgtggtagaggccggggtaatggtggtggcaga
gggaataaaagcggtgggcgaggtggaaagaagccagtggagaagtctgctgcggatctc
gacaaagatctcgaaagctatcatgctgaagctatgaacatctcttaa
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integrated database retrieval system
