Arabidopsis thaliana (thale cress): AT1G70980
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Entry
AT1G70980 CDS
T00041
Symbol
SYNC3
Name
(RefSeq) Class II aminoacyl-tRNA and biotin synthetases superfamily protein
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AT1G70980 (SYNC3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ath01007
]
AT1G70980 (SYNC3)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ath03016
]
AT1G70980 (SYNC3)
Enzymes [BR:
ath01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
AT1G70980 (SYNC3)
Amino acid related enzymes [BR:
ath01007
]
Aminoacyl-tRNA synthetase
Class II (A)
AT1G70980 (SYNC3)
Transfer RNA biogenesis [BR:
ath03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AT1G70980 (SYNC3)
Prokaryotic type
AT1G70980 (SYNC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
WHEP-TRS
tRNA-synt_2d
Desulfoferrodox
Motif
Other DBs
NCBI-GeneID:
843436
NCBI-ProteinID:
NP_177254
TAIR:
AT1G70980
UniProt:
Q9SSK1
A0A178WMG1
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All DBs
Position
1:26762041..26764623
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AA seq
571 aa
AA seq
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MGDEIVPPANQLAADNLENDGSTVQKAQFSDRVLIRSILGGGAKLAGQKVRIGGWVKTGR
QQGKGTFAFLEVNDGSCPANLQVMVDSSLYDLSRLVATGTCVTVDGVLKIPPEGKGLKQS
IELSVETVIAVGTVDPTTYPLPKTKLTPEFLRDVLHLRSRTNLISAVARIRNALAFATHS
FFQEHSFLYIHTPIITTSDCEGAGEMFQVTTLINHTERVEQDLIDNPPPTEADVEAARLI
VKERGEAVAQLKVAKASKEEITASVAQLSVAKASLAHVEERLRLKPGLPKNDGKIDYSND
FFGRQAFLTVSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFADIH
DDMNCAEAYVKYMCKWLMDKCGDDMELMDKNVDEGCTKRLNMVAKASFKRVTYTEAIERL
EKAVAQGKVVFDNKVEWGIDLASEHERYLTEVEFDQKPIIVYNYPKGIKAFYMRLNDDEK
TVAAMDVLVPKVGELIGGSQREERYDVIKQRIEEMGLPMEPYEWYLDLRRYGTVKHCGFG
LGFERMIQFATGIDNIRDVIPFPRYPGKADL
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgagattgtgcctccggcgaatcagttagccgccgataacttggaaaacgat
ggatctacggtgcagaaagcgcaattttcagacagggttctgattcgatcgattttgggc
ggcggagctaaactcgccggtcaaaaggttagaatcggtggttgggttaaaaccggaaga
cagcaagggaaagggacttttgctttccttgaggttaacgatgggtcttgtccagcgaat
ctccaggttatggttgattcatctctttatgatctctctaggttggttgcgactggaact
tgtgttactgttgatggagttttgaagattcctccggaaggtaaaggtttgaagcagagt
attgagcttagcgttgagacggtgattgcggtgggaactgttgatccgactacgtatccg
cttcctaagactaagttgactcctgagtttctcagagatgtgcttcatcttcgttctagg
actaacttgatctcagcagttgcaagaatccgtaacgcgcttgcttttgcgacgcatagt
ttttttcaagaacatagtttcctttacattcacactcctatcatcacaacaagtgattgt
gaaggtgctggtgaaatgttccaagtgacaaccttgatcaatcacactgagagggttgag
caggatctcattgataaccctccaccaactgaggctgacgttgaagcggccaggcttatt
gtcaaggagagaggtgaagctgttgcgcaacttaaagttgccaaggcgagcaaggaagag
atcactgcttccgttgctcaactaagtgtagcaaaggcgagtttagctcatgttgaagag
aggttaaggcttaagcctggactacctaagaatgatggtaaaattgattattccaatgat
ttctttggccgtcaagctttcttgacagtttctggtcagttacaagtggagacctatgct
tgcgctcttagcagcgtgtatacatttggtcccacttttcgggcagagaactctcacact
tcaaggcatttagctgagttctggatggttgagcctgaaattgcttttgcagatatacat
gacgacatgaactgtgcagaggcgtatgtgaaatacatgtgcaaatggttgatggataaa
tgtggcgatgacatggaacttatggataagaacgtcgacgagggatgcactaaaaggcta
aacatggttgccaaagcctcgtttaagcgtgtaacatacactgaagcaatagagcgactt
gagaaagctgtagctcaaggaaaggttgtttttgataacaaagtggagtggggaatcgac
ttggcctcagagcatgaaagatacttgacagaggttgagtttgatcaaaagccaataatt
gtgtataactacccgaaaggaatcaaagctttttacatgagacttaacgatgatgagaag
acagttgctgccatggatgtccttgttccaaaggttggagaactcattggtggaagccaa
agggaagaacgatatgatgttatcaaacagaggatcgaggagatgggtctaccaatggag
ccatatgagtggtacctagacttgcgtcgttatggaacagtgaagcattgtggatttgga
cttggcttcgaacgtatgattcagttcgctacaggaattgataacatcagagatgttatt
cctttccctcgctatcctggaaaagctgatctctga
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