Arabidopsis thaliana (thale cress): AT1G71270
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Entry
AT1G71270 CDS
T00041
Symbol
POK
Name
(RefSeq) Vps52 / Sac2 family
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT1G71270 (POK)
Membrane trafficking [BR:
ath04131
]
Protein recycling
Others
EARP complex
AT1G71270 (POK)
Endosome - Golgi transport
Tethering complex
GARP complex
AT1G71270 (POK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
SPG48
GnsAB_toxin
Motif
Other DBs
NCBI-GeneID:
843468
NCBI-ProteinID:
NP_565015
TAIR:
AT1G71270
UniProt:
Q94KD3
A0A7G2E487
LinkDB
All DBs
Position
1:26863587..26870015
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AA seq
707 aa
AA seq
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MSDISIDALGQTMGDFSNHEKLGFDLGAFVGDLAFEEDSGSEDISLEGLQQELEECESDE
VVANILSSGDKLREYAKGVENNLRKVELDSIEDYIKESDNLVSLHDQIRDCDSILSQMET
LLSGFQEEIGSISSDIKILQEKSMDMGLRLKNRRVAESKLAKFVEDIIVPPKMIDVIVDG
EVNEEYMKTLEILSKKLKFVEADQAVKSSKALKDVEPELEKLRQKAISKVYDFIVQKLIA
LRKPKTNIQILQQSVLLKYKYIISFLKEHGKEVFMDVRAAYIDTMNKVLSAHFRAYIQAL
EKLQLDIATAYDLIGVETRTTGLFSRAREPLKNRSAVFALGDRIKIIKDIDQPALIPHIA
EASSLKYPYEVLFRSLHKLLMDTATSEYMFCDDFFGEESIFYEIFAGPFSVIDEHFNPVL
SNCFDAIGLMLMIRIIHHHQLIMSRRRIPCLDSYLDKVNISLWPRFKMVFDSHLSSLRDA
NIKTLWEDDVHPHYVMRRYAEFTASFIHLNVEYGDGQLDINLERLRMAVDGLILKLAKLF
PRPKQQIVFLINNYDMTIAVLKEAGPEGGKIQMHFEEMLKSNTSLFVEELLVEHFSDLIK
FVKNRASEDSSLNPERSITIAEVEPLVKDFGSRWKTAIELMDKDIITSFSNFLCGMDILR
AALTQLLLYYTRLTDCIKKIDGGSALNRDLVSIQSIMYEIRKYSKTF
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacatttccattgacgcattgggccaaactatgggggactttagtaatcatgag
aaacttggatttgatttaggagcatttgttggagacttggcttttgaagaagattcaggc
agtgaggatatttcattggaagggcttcaacaagaacttgaagaatgtgaaagtgatgag
gttgttgccaatatactgtctagtggtgacaaacttagagaatatgcaaaaggggttgaa
aacaatctacgcaaggttgaattggattcaatcgaggattacataaaggaaagtgacaac
ctagtctcacttcacgatcagattcgtgactgtgacagcatcctgtcacaaatggaaact
cttctcagtggatttcaggaagagattggttctataagttcagacataaagattcttcaa
gaaaagtcaatggacatgggtttgagattgaaaaaccgcagggtggctgaatcaaagcta
gcaaaatttgtcgaagacattatagtgccaccaaagatgatagatgtaattgttgacgga
gaggtgaatgaagagtatatgaaaacgcttgaaattctgagtaagaagctaaaatttgta
gaagcagatcaggcagttaaaagttccaaagcgttaaaagatgtagagcctgagctcgaa
aagcttcggcagaaagctatttccaaggtgtatgattttattgtccagaagcttatagcc
ctgaggaaacccaaaacaaacattcagattcttcaacagagtgtgttattaaagtacaag
tatattatctccttcctcaaggaacatggaaaagaagtgtttatggatgttcgtgctgca
tacattgataccatgaacaaggtgttaagtgcacattttcgtgcttatattcaagcactt
gagaaactacagttagatatagccacagcatatgacttaattggggtagagaccagaacc
accggcctcttctcaagagctagggagccactaaagaaccgctctgccgtttttgctttg
ggtgacaggataaaaattataaaggatattgatcaacctgctttgatcccgcacatagcc
gaagccagctctctcaaatatccttatgaagtgctcttcaggagcctgcacaagctactt
atggatacagctacttctgagtatatgttttgtgatgatttctttggtgaagagtccata
ttctatgaaatttttgcgggtccattttctgtcatcgatgagcacttcaatcccgttctt
tcaaactgttttgatgctattggcctgatgcttatgattcgcataatacaccaccaccag
cttatcatgtctcgccggagaattccatgcctggactcatatctggacaaggttaatatt
tctttgtggcctcgtttcaagatggtgtttgactcacaccttagcagtctgagagatgca
aacattaagacattatgggaagatgatgttcatcctcactatgtcatgaggcgttatgct
gaattcacggcttcgtttattcacctaaacgttgaatatggagatgggcagcttgatata
aatctggagcggttaagaatggctgtagatgggttgattctcaagcttgcaaagttgttc
ccaaggccaaagcagcaaattgtgtttctcataaataactacgatatgacaatcgctgta
ctgaaggaagctggaccagaaggtgggaaaattcaaatgcattttgaggaaatgctaaag
agtaacacttcattatttgtggaagaactgctggtggagcatttcagtgatttgatcaaa
ttcgtgaaaaatcgagcttctgaggattcgagcttaaatccagagaggtccattacaatt
gctgaagtagagccactggtgaaggactttggaagcagatggaagacagcgattgagttg
atggacaaagacatcataacttccttcagtaacttcttgtgtggtatggatattttgaga
gctgcattgacacaactattgctctattacacaagactcacagactgcatcaagaagata
gatggtggatctgctctgaatagggatcttgtctccatccaatctatcatgtacgagatc
aggaaatactccaagactttctga
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integrated database retrieval system
