Arabidopsis thaliana (thale cress): AT1G71280
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Entry
AT1G71280 CDS
T00041
Name
(RefSeq) DEA(D/H)-box RNA helicase family protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT1G71280
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AT1G71280
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
Pre-60S particles
Helicases
AT1G71280
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
CTE_SPB4
Helicase_C
ResIII
SWI2_SNF2
CMS1
AAA_22
Motif
Other DBs
NCBI-GeneID:
843469
NCBI-ProteinID:
NP_177284
TAIR:
AT1G71280
UniProt:
Q9FVV4
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All DBs
Position
1:complement(26870093..26872152)
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AA seq
465 aa
AA seq
DB search
MDSSPPNTIIEEAPPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVD
AATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAK
CREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQ
VNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNPYLKCEADQKSSQLVHLLIENKNKK
LVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCTD
VAARGLDIPGIVYIRSLAIKDREVLEKGLKAFVSFVRAYKEHQCSYIFSWKGLEIGKLAM
GYGILSFPYISEVKQDRIGIVGFTPVQGITFEDIKFKNKSREKQRQQNLLARKDKLQQEK
RGKRKKSSKEAVDDSNKASRKRKLTGRQRQTIQTAQDEEEMNLRL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggattcatcgccaccgaacactatcatcgaggaggcgccgccgcgtttctctgaactc
aaacctccgctctcagaagatatcatcgaggcgcttgaccggtccggtttcgaggtctgc
actccggttcaggccgagacgatccctttcctctgcagccacaaggatgttgtcgtcgac
gcagccactggttctggaaaaaccctagctttcctccttcccttcatagagattatccgt
cgatccaactcctaccctccgaagccacaccaggtaatgggggtgattatatcgccaacg
agagagctatcagcgcagatacataaggtggcaagagccgttcgtctcgactttgccaaa
tgtcgagaggtggaagctgacatgaatactctcgaagaagaaggagccaatctcttgatc
ggcacccctggaaggctttcagatatgatgaaacgaatggagtttctggattttcgaaat
ctcgagattcttatcttagatgaggccgatagacttttggatatggggttccagaagcag
gtcaattacattatatctcgcttgccaaagcaacgtaggactggcctcttttcagctaca
caaacacaagctgttgcagacctggccaaggctggccttaggaatccttatttgaaatgc
gaagcagatcaaaagtcatctcaactagtgcatctcctgatcgagaacaaaaataaaaag
cttgtcgtattcttcatgacatgtgcttgtgttgattactggggactcgtaatttcaaaa
attcctagcctcaagtccatttccttctttcccacccatgggaagatggatcagaaaggt
agagacacggcattagcttcgtttacagaggcatcaagcggtgtccttctatgcacagat
gtcgctgcacgtggacttgacattccaggcatcgtttacatacgttcactagccatcaag
gaccgggaagtgttggagaagggattaaaggcatttgtttcctttgtccgtgcttataag
gagcatcaatgctcttacattttcagttggaaaggacttgaaatcggaaagttagccatg
ggatatggcatcttgtcttttccttacatatctgaagttaaacaagacagaattggcatt
gtcggttttacacctgtccaaggcatcacgtttgaggacataaaattcaagaacaaatct
cgggagaaacaaaggcagcaaaacttattagcaaggaaagacaaactgcaacaagaaaag
agagggaaacgcaagaaaagctccaaagaggcggttgatgattctaacaaagcgtcgaga
aagagaaagttaacggggaggcaaagacaaactatccaaacagctcaagatgaagaagaa
atgaatttgagattatag
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