Arabidopsis thaliana (thale cress): AT1G71370
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Entry
AT1G71370 CDS
T00041
Name
(RefSeq) DEA(D/H)-box RNA helicase family protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT1G71370
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AT1G71370
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
Pre-60S particles
Helicases
AT1G71370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
843478
NCBI-ProteinID:
NP_177293
TAIR:
AT1G71370
UniProt:
Q8GXD6
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All DBs
Position
1:complement(26897005..26899434)
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AA seq
558 aa
AA seq
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MDSSPPKTITKALPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDA
ATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNV
NSVLLVGGREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLL
DMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNAMEVISGAESKSKTSSGL
YCEYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTH
GKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRT
ARMERQGRAIVFLMPKETDYVEFMRIRRVPLQERKCSENASDVIPIIRSLAIKDRAVLEK
GLQAFVSFVRAYKEHHCSYIFSWKGLEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQ
GITFEDIKYKNKSREKQRQQNLLARKDKLQQEKRGKRKKSSKEAVDDSNKASRKRKLTGR
QRQTIQTAQDEEEMNLRL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggattcatcgccgccgaagactatcaccaaggctctgccgcgtttctctgaactcaaa
cctccgctctcagaagatatcatcgaggcgcttgaccggtccggtttcgaggtctgcact
ccggttcaggccgagacgatccctttcctctgcagccacaaggatgttgtcgtcgacgca
gccactggttctggaaaaaccctagctttcctccttcccttcatagagattatccgtcga
tccaactcctaccctccgaagccacaccaggtaatgggggtgattatatcgccaactaga
gagctatcagcgcagatacataaggtggcagagccatttgtctcgactttgccaaatgtg
aactctgtcctgcttgttggaggtcgagaggtggaagctgacatgaatactctcgaagaa
gaaggagccaatctcttgatcggcacccctggaaggctttcagatatgatgaaacgaatg
gagtttctggattttcgaaatctcgagattcttatcttagatgaggccgatagacttttg
gatatggggttccagaagcaggtcaattacattatatctcgcttgccaaagcaacgtagg
actggcctcttttcagctacacaaacacaagctgttgcagacctggccaaggctggcctt
aggaatgctatggaagttatatcgggagctgagtcaaagtcgaaaacgtcttctggtctg
tattgtgagtatttaaaatgcgaagcagatcaaaagtcatcacaactagtgcatctcctg
atcgagaacaaaaataaaaagcttgtcgtattcttcatgacatgtgcttgtgttgattac
tggggactcgtactttcaaaaattcctaccctcaagtccatttccttcttttccacccat
gggaagatggatcagaaaggtagagacacggcattagcttcgtttacagaggcatcaagc
ggtgtccttctatgcacagatgtcgctgcacgtggacttgacattccaggcatcgattac
gttgttcagtatgatcccccacaagacccagatgtatttatccatagggttggcaggact
gcaagaatggaaagacaaggtagggccattgtgtttttaatgcccaaggagacagactat
gtagagttcatgcgcattcgaagggtccctcttcaggagagaaaatgctctgagaacgct
tctgatgtcatcccgattatacgttcactagccatcaaggaccgggcagtgttggagaag
ggattacaggcatttgtttcctttgtccgtgcttataaggagcatcactgctcttacatt
ttcagttggaaaggacttgaaatcggaaagttagccatgggatatggcatcttgtctttt
ccttacatatctgaagttaaacaagacagaattggcattgtcggttttacacctgtccaa
ggcatcacgtttgaggacataaaatacaagaacaaatctcgggagaaacaaagacagcaa
aacttactagcaaggaaagacaaactgcaacaagaaaagagagggaaacgcaagaaaagc
tccaaagaggcggttgatgattctaacaaagcgtcgagaaagagaaagttaacggggagg
caaagacaaactatccaaacagcgcaagatgaagaagaaatgaatttgagattatag
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