Arabidopsis thaliana (thale cress): AT1G71800
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Entry
AT1G71800 CDS
T00041
Symbol
CSTF64
Name
(RefSeq) cleavage stimulating factor 64
KO
K14407
cleavage stimulation factor subunit 2
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AT1G71800 (CSTF64)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT1G71800 (CSTF64)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
AT1G71800 (CSTF64)
U7-dependent histone pre-mRNA processing factors
AT1G71800 (CSTF64)
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Ortholog
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GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
partial_CstF
RRM_7
DUF8400
RRM_10
Motif
Other DBs
NCBI-GeneID:
843510
NCBI-ProteinID:
NP_177325
TAIR:
AT1G71800
UniProt:
Q9M9G6
LinkDB
All DBs
Position
1:26999374..27002458
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AA seq
461 aa
AA seq
DB search
MASSSSQRRCVFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDE
ETALSARRNLQSYEINGRQLRVDFAENDKGTDKTRDQSQGGPGLPSTTTVTESQKQIGGP
VDSNMHQPVGLHLATTAASVIAGALGGPQVGSQFTQSNLQVPASDPLALHLAKMSRSQLT
EIISSIKLMATQNKEHARQLLVSRPQLLKAVFLAQVMLGIVSPQVLQSPNIVQAPSHMTG
SSIQDAQLSGQNLLPPLAQRSQQLSRAPHSQYPVQQSSKQPFSQIPQLVAQPGPSSVNPP
PRSQVKVENAPFQRQQVVPASTNIGYSSQNSVPNNAIQPSQVPHQALPNSVMQQGGQTVS
LNFGKRINEGPPHQSMNRPSKMMKVEDRRTTSLPGGHVSNSMLPNQAQAPQTHISPDVQS
TLLQQVMNLTPEQLRLLTPEQQQEVLKLQQALKQDHMMQPS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcatcatcccaacgacgctgcgtttttgttgggaacattccttacgacgcg
accgaggaacaacttagagaaatttgtggagaagttggacctgttgtctcgtttagatta
gttacggatagagaaactggtaaaccaaaaggctacggattttgtgagtataaagacgaa
gaaacagcattaagtgctcgtcgtaatcttcagagttatgaaatcaatggtcgtcaatta
agagttgattttgctgagaatgacaaaggcactgacaaaacccgtgatcagagtcaagga
ggacctggtttgccatctactactactgtgacagagtctcaaaagcagattggagggcca
gtagattcaaatatgcatcagccagttggtctccaccttgctacaacagctgcatctgtt
atagcgggtgcgctaggtggtcctcaggtcggttcgcagtttacgcaaagtaatctgcag
gttccagctagtgatcccctggctcttcatctagccaagatgtcaagaagtcagcttact
gaaattatatcgtccattaagttaatggctacacaaaataaggaacatgctagacagttg
ttggtttcaagacctcagttgctaaaagctgttttcctggcgcaggtaatgcttgggatt
gtgagtccgcaagtgttacagtcgccaaatattgttcaggccccaagtcatatgacaggg
tcttcaattcaagatgcgcaattatctggtcaaaaccttttaccgccactggcacaaagg
tcacagcagctaagtcgtgctccccatagtcagtatcctgtccagcaatcttctaaacaa
ccttttagtcagattccacaactagtagcacaaccaggtccttcttctgtgaatcctcct
cctagatcccaagttaaagtcgaaaacgctccattccaacgccagcaagtggttccagct
tccaccaacataggttatagtagtcagaattcagttccgaataatgctatccagccatct
caagtaccccaccaagcattaccaaattctgtgatgcagcaaggtgggcaaacggtatca
ttaaattttggcaaaagaataaacgagggtcctcctcatcaatcaatgaacagaccatca
aagatgatgaaagtggaggataggagaactacttcactccctggaggtcatgtgtctaat
tcaatgcttccgaatcaagcacaagctccccagacacatatctctcccgatgttcagtca
acattgctccagcaagtaatgaaccttacgccagaacagttgagattactgactccagag
caacaacaagaggtcttaaagctgcaacaagccctcaagcaagaccacatgatgcagcct
tcatag
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