Arabidopsis thaliana (thale cress): AT1G71840
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Entry
AT1G71840 CDS
T00041
Name
(RefSeq) transducin family protein / WD-40 repeat family protein
KO
K24725
angio-associated migratory cell protein
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ath04990
]
AT1G71840
Domain-containing proteins not elsewhere classified [BR:
ath04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
AT1G71840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
WD40_like
Beta-prop_Vps41
eIF2A
Beta-prop_NUP159_NUP214
Beta-prop_LRRK2
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
PEP5_VPS11_N
WD_LRWD1
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR75_2nd
PQQ
WDR54
Beta-prop_IP5PC_F
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
843514
NCBI-ProteinID:
NP_177329
TAIR:
AT1G71840
UniProt:
Q8RXQ4
A0A178WIN8
LinkDB
All DBs
Position
1:27022138..27024551
Genome browser
AA seq
407 aa
AA seq
DB search
MSNNTNNTEMNNLAMEEEDEGEIFLGESDVLREIDVDEEDLPEADDDDMDDDGEQFDEND
DSVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLA
FSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLW
MWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPY
HTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIP
LAATGGMDKKLIIWDLQHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLG
NCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFESSEFQNKVT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataatactaataatacagagatgaataatctagcgatggaagaagaggatgaa
ggagagattttccttggtgaatccgatgtcctccgtgaaatcgatgtcgacgaagaagat
cttcctgaagcagatgatgatgatatggacgatgatggtgaacaatttgatgaaaacgat
gactctgttcacacattcactggtcacaaaggtgagctttatgcattggcttgtagtcca
acagatgctacacttgttgcaactggaggtggagatgataaagcatttctctggaaaatt
ggtaatggagattgggctgctgagcttcctggtcacaaggactctgtctcttgtttagct
tttagctatgatggacagttacttgcttctggaggattagatggtgttgtacagatcttt
gatgcatcatcagggactttgaaatgtgttttggatggtcctggtgctggaatcgagtgg
gtgagatggcatccgagaggacacattgtgttggctggatcagaagattgttctctatgg
atgtggaatgctgataaagaagcttatcttaatatgttttcgggccataatctaaatgtt
acttgtggtgacttcacccctgacggtaaactaatttgtactggctctgatgatgcaagt
ttgatagtatggaacccaaaaacttgtgaaagcattcatattgttaaaggtcatccttat
catacggaaggattgacatgcttagacattaactcgaactcaagtcttgctatcagtggc
tcaaaagacggttctgttcacattgtgaatatagtcaccggaaaggttgtgagctccttg
aattctcatacagattcagttgaatgtgtgaagttttcaccaagctccgcaaccatccct
ttggctgcaacaggtggaatggacaagaagcttataatctgggatctgcagcattccact
cccaggttcatctgcgagcacgaggaaggtgtgacatctctgacttggataggaacctcc
aagtacttagccactggctgtgccaatggtacagtgagcatttgggacagcttattaggc
aactgcgtccatacctaccatggtcaccaagatgcggtccaggccatctcagtctctacc
aacacggacttcattgtttcggtatctgtcgataacactgctagagtctttgagtcatct
gagttccaaaacaaagtgacatag
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