Arabidopsis thaliana (thale cress): AT1G72090
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Entry
AT1G72090 CDS
T00041
Name
(RefSeq) Methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ath03016
]
AT1G72090
Enzymes [BR:
ath01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
AT1G72090
Transfer RNA biogenesis [BR:
ath03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
AT1G72090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
843540
NCBI-ProteinID:
NP_565035
TAIR:
AT1G72090
UniProt:
Q9C7H2
A0A178W755
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All DBs
Position
1:27123567..27126950
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AA seq
601 aa
AA seq
DB search
MEDIEDLLAGGVGGAPPGFRLPLNAVGINPKTNKSKRISSKPDQITASNRDSLAPPSMKI
PGTQTIYIKTFGCSHNQSDSEYMAGQLSAFGYALTEVPEEADLWLINTCTVKSPSQSAMS
TLITRGRSGKKPLVIAGCVPQGSRDLKELEGVSVVGVQQIDRVVEIVEETLKGHEVRLLT
RKTLPALDLPKVRRNNFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVERVRTVIS
EGVKEIWLSSEDTGAYGRDIGVNLPILLNAIVKELPSDQSTMLRIGMTNPPFILEHLKEI
AAVLRHPCVYTFLHVPVQSGSDSVLTAMNREYTASEFRTVVDTLTELVPGMQIATDIICG
FPGETDEDFSQTVELIKDYKFPQVHISQFYPRPGTPAAKMKKVQSKIVKQRSRELTSVFE
AFAPYTGMECREERIWITEVATDGIHLVGHTKGYVQVLVTGPESMLGTSAMARITSVGRW
SVFGEVIETFSSANRETKSREETKLPCSSNVSTCETCTCSAESCGEERSGEACNISGNIS
GQDDNKGKSKKEEKEVQEVVVPGSSVANWGFIDKALVCGVFVSSVTILVLLISIACRVLL
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggaggatatcgaggatttgttggccggaggagtcggtggtgcaccaccgggattccga
ttacccttgaatgcagtcggaattaatccgaagacgaataagagcaaacgtattagctcg
aaaccggatcaaattactgcttcgaatcgtgactcgcttgctccaccatcgatgaagatt
ccaggaactcagacgatatacatcaagacgtttggatgttctcataatcagagtgatagt
gagtatatggctggtcagctttctgcatttggctatgcgttgacagaagtcccggaggaa
gctgatttatggctcattaacacctgtactgtgaagtcccctagccagtctgcgatgtct
actttgataacgaggggtagaagtgggaaaaagcctcttgtgattgcgggatgtgttcct
cagggcagtcgtgatcttaaagaactggaaggcgttagtgtagttggagtccaacagatt
gatcgtgttgttgagattgttgaagaaactcttaagggtcatgaagtacggttgctgact
cggaagactttgcctgcgcttgatctcccaaaggtgcggaggaacaattttatcgaaatt
ctccccattaatgttggctgtttgggtgcctgtacttactgcaagaccaagcatgcccgt
ggtcatttaggaagttacacagttgatagtcttgtggagcgggtgagaactgtaatctct
gaaggagtcaaggagatttggttaagcagcgaggacactggagcatatggtcgtgacata
ggagttaatcttccaatactgcttaatgctatcgttaaggaacttccttctgatcaaagc
acaatgctaaggattgggatgactaatcctccctttattttagagcatttgaaagaaata
gcggcagtgttacgtcacccatgtgtctacacctttcttcatgtccctgtgcaatctggt
agcgattctgtgttgacggccatgaacagggaatatacagcaagtgagttcaggactgtg
gtagacaccttaacagagcttgtgccaggaatgcaaattgctactgatataatatgcggt
tttcctggtgaaaccgatgaagatttttctcagacagttgaactcatcaaggattacaag
tttcctcaagttcatatttctcagttttaccccagaccagggaccccagcagcaaagatg
aagaaggtacaaagtaaaatagtgaagcaacgaagccgtgaattgacttctgtctttgag
gcttttgcgccttacaccggaatggagtgcagagaagagaggatatggataactgaagta
gctactgatggaattcatttggttggacatacgaagggatatgtacaggtcttagttact
ggaccagaaagtatgcttgggacttcagctatggcgaggataacatctgtggggagatgg
tcagtatttggggaagtgattgagacatttagctctgcaaatagagaaacaaaatcccga
gaggaaacaaagctgccttgttcgtcgaatgttagcacttgtgagacttgcacttgctct
gctgagagctgtggagaagagagatcaggagaggcgtgtaacatttctggaaatatctca
ggacaagatgataacaagggaaagtcaaagaaagaagagaaggaggtacaagaggtcgtc
gtaccgggaagcagcgtagcaaattggggtttcattgataaggcacttgtctgtggagtg
ttcgtaagctctgtcaccattcttgttttgttgattagcattgcatgtagagttttgctg
cggtaa
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