KEGG   Arabidopsis thaliana (thale cress): AT1G73720
Entry
AT1G73720         CDS       T00041                                 
Symbol
SMU1
Name
(RefSeq) transducin family protein / WD-40 repeat family protein
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ath03041]
    AT1G73720 (SMU1)
Spliceosome [BR:ath03041]
 Complex B
  Other components
   Complex B specific factors
    AT1G73720 (SMU1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 LisH_TPL Beta-prop_EML Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_SCAP Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_WDR19_1st DUF7165 Beta-prop_WDR35_TULP_N RMC1_N Beta-prop_LRRK2 Beta-prop_NOL10_N Beta-prop_HPS5 Beta-prop_IP5PC_F PQQ_3 Nucleoporin_N zf_topless WD_LRWD1 WD40_like VPS8_N Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 843707
NCBI-ProteinID: NP_177513
TAIR: AT1G73720
UniProt: Q8W117 A0A178WHG8
LinkDB
Position
1:27724991..27730031
AA seq 511 aa
MALEIEARDVIKIMLQFCKENSLNQTFQTLQSECQVSLNTVDSVETFISDINSGRWDSVL
PQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQAERYLRMEHL
LVRSYFDPHEAYGDSTKERKRAQIAQAVAAEVTVVPPSRLMALIGQALKWQQHQGLLPPG
TQFDLFRGTAAMKQDVEDTHPNVLTHTIKFGKKSHAECARFSPDGQFLASSSVDGFIEVW
DYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRR
FDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGS
RIITASSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASVNSIHLFPKNTEHIVVCNKTSSI
YIMTLQGQVVKSFSSGNREGGDFVAACVSTKGDWIYCIGEDKKLYCFNYQSGGLEHFMMV
HEKDVIGITHHPHRNLLATYSEDCTMKLWKP
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggcgctcgaaatcgaagctcgagatgtaataaagattatgcttcagttctgcaaagaa
aattccttgaatcagacattccagacattacaaagcgagtgtcaggtttccttgaataca
gtagacagcgtcgagacgtttatttctgatattaatagtggaagatgggactcggtacta
cctcaagtttcccagcttaaacttcccaggaataaacttgaagacctttatgaacagatt
gtattggagatgatagaacttcgagagttggacactgcccgagctattttgagacaaact
caggtgatgggtgtcatgaagcaggagcaagcagaaagatatttgcggatggagcatctt
ctagtcagaagctattttgatccgcatgaggcttatggagactcaactaaagaaagaaaa
cgggcacagattgctcaagctgtggctgccgaggttaccgtggtaccaccttcacggtta
atggctttgataggtcaggctttaaagtggcaacaacatcaaggcctgctccctccagga
acacagtttgacctctttcgtgggacggcagctatgaagcaagatgtagaagacacacat
cctaatgttcttactcataccataaagtttggtaaaaagagtcatgcagaatgcgctaga
ttctcaccagatggacagtttcttgcatcttcttctgtggatggttttatcgaggtatgg
gattacataagtggaaagctcaagaaggatttgcaatatcaagctgatgaatctttcatg
atgcatgatgatcctgtcctctgcatagactttagcagagattcagagatgcttgcatct
gggtcacaagatggaaagattaaaatctggcgtataaggactggtgtatgcatacgtcgt
tttgatgcacattcccaaggagttacaagtctttccttctctcgggatggaagccaatta
ctgagtacctcctttgaccaaactgcaagaatccatggtttgaaatctgggaaattgttg
aaagaatttcgtggtcacacatcttatgtaaatcatgccatctttacaagtgatggaagc
cgtattatcactgcctccagtgattgtacagtaaaggtctgggattctaagacgacagat
tgtctacaaacattcaagccgccacctccgttaaggggaactgatgcatcagtcaactct
attcacttgttccccaaaaacacagaacacattgttgtgtgcaacaagacatcatctata
tacattatgacactccaaggacaggttgtgaagagtttctcatccggtaatagggaagga
ggagattttgtagcagcatgtgtatctacaaaaggagattggatatactgcatcggcgaa
gacaagaaactgtactgcttcaactatcaatctggtggacttgagcatttcatgatggtg
catgagaaggatgtgattggtataacacaccacccgcatagaaacctccttgctacctat
agtgaagattgcactatgaagttatggaagccctga

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