Arabidopsis thaliana (thale cress): AT1G77030
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Entry
AT1G77030 CDS
T00041
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT1G77030
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AT1G77030
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
Pre-60S particles
Helicases
AT1G77030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
844039
NCBI-ProteinID:
NP_177829
TAIR:
AT1G77030
UniProt:
O49289
A0A178WHB7
LinkDB
All DBs
Position
1:complement(28947743..28951655)
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AA seq
845 aa
AA seq
DB search
MVEGKGFLVSSVTELHRKEKQKKKGKSGGFESLNLGPNVFNAIKKKGYKVPTPIQRKTMP
LILSGVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKE
LGKFTDLRVSLLVGGDSMEDQFEELTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFD
EADSLFGMGFAEQLHQILTQLSENRQTLLFSATLPSALAEFAKAGLREPQLVRLDVENKI
SPDLKLSFLTVRPEEKYSALLYLVREHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSV
CYGDMDQDARKIHVSRFRARKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVG
RAARAGRTGCAYSFVTPEDMPYMLDLHLFLSKPVRPAPTEDEVLKNMEEVMTKTSQAIDS
GVTVYGRFPQKTIDLIFNRTREMIDSSAELDSLERTSTKAFRLYSKTKPSPSKESIRRAK
DLPREGLHPIFRSIIETGELEAMSFFQKIKNFRPKQTILEAEGEVAKSKHVKGPAGQWVD
VMKKKRAIHEEIINTRHQQNQKTSNNHLEMEAEPTTSFVDGTVEGSKVSGKKRKAQETFK
DDEFFISSIPVNHHSEAGLSLRGNEGFGSNRLDAAVLDLVADDGQGIKQQQSNYHWDKKG
KKYIKLNNGDRVTASGKIKTESGAKATAKKTGIYKRWQERSHKKVSRDSGDADETTRMSG
RGGRDGKRRQGSVPNAHVRSEIKDLDQVRKERQQKANKVSYLQSKRGGRGGRGGARGGRG
GGARGGRGGSRDFGGGGRDFGSSSDRGGRSGGRDFGGRRGGASTSSRGGKRGGGRGGGGK
RGRGR
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaggaaagggcttcctcgtgagctcagtgactgagcttcaccgtaaagagaaa
cagaagaagaaaggcaaatctggaggattcgagtcactaaatctcggacctaatgtcttc
aatgcaatcaagaaaaagggttacaaagttcctacaccaattcagaggaagacgatgccg
cttattctctctggcgtcgatgttgtcgctatggctcgaaccggttctggaaaaaccgca
gcttttctcatccctatgcttgagaagctcaaacaacacgttcctcaaggaggtgttaga
gcactcatcttgtctcctactcgtgacttagctgagcagactctgaagttcaccaaggaa
cttggcaaatttacagatcttcgtgtatccttactggttggtggagatagtatggaagac
cagtttgaagagttaacaaagggacctgatgtgattattgctactcctgggagacttatg
catcttttatctgaggttgatgatatgacgctaaggacggttgagtatgtagtttttgat
gaggcagatagtctgtttggtatggggtttgctgaacagttacatcagattctaactcag
ttaagtgagaataggcagactttgctatttagtgccactttaccaagtgcccttgctgaa
tttgcaaaggctggtttgcgtgagcctcagcttgttcgtttagatgttgagaataagata
agtcccgatttgaagctttcgtttttgactgtacgaccggaagagaagtattctgcattg
ctgtacttggttagggagcatataagttcagatcaacagaccttgatatttgtttcgaca
aagcatcatgtggaatttgtcaactcattgtttaagttggagaatattgagccatctgta
tgttatggtgatatggatcaagatgcacgtaagattcatgtatcaaggttcagagcgagg
aagactatgttgttgattgtgacagatattgctgctaggggtattgacataccattgctt
gataatgttataaactgggatttccctccgagaccgaagatttttgttcatcgtgtggga
agagctgccagggctggtcgtacaggctgtgcatattcctttgttacacctgaggatatg
ccatatatgttggatcttcatctgttcctctcaaaaccggtcaggccagcgcccactgag
gatgaggtcttgaagaacatggaagaagtaatgaccaaaactagtcaagcaattgatagt
ggagtcaccgtctatggtcgtttcccacagaaaaccattgatcttatctttaatagaacc
agagaaatgattgattcatctgcagaattagattcccttgaacgaacatccaccaaagct
tttcgcttgtattcaaaaacaaaaccctcaccgtcaaaagaatccattaggagagcaaag
gatttaccacgagaaggcttgcatcccatcttcagaagcattattgaaactggggaatta
gaggcaatgtcgtttttccagaaaattaaaaatttcagacccaagcaaacgatacttgaa
gcagaaggtgaagttgccaaatccaaacatgtgaagggtcccgctggccaatgggttgat
gtgatgaagaagaaaagagctattcatgaggagatcatcaatacaagacatcagcagaat
caaaagacttccaataatcatttggagatggaagctgaacctacaacttcttttgttgat
ggcacagtagagggaagcaaagtaagcggtaagaaaagaaaggcacaagaaaccttcaag
gacgatgaattctttatcagctccataccagtaaatcatcattcagaggcagggctatct
ctgaggggtaacgaaggatttggatcgaataggttggacgctgctgttctagatctagtt
gcagatgatgggcaagggataaagcagcaacaatcaaattatcactgggacaagaaaggt
aagaagtacatcaagttgaacaatggagatcgagtaacagccagtggaaagataaagaca
gagagtggagctaaagcgactgcaaagaagacagggatatacaagagatggcaagagagg
tctcacaagaaagtatcccgagacagcggtgatgcagacgaaaccacacgaatgtcaggt
agaggaggccgagatgggaagagacggcaaggatcagtgcctaacgcacatgttcgttca
gagatcaaagatctggaccaggtgcgtaaggagagacagcaaaaggcaaacaaagtttct
tatctgcagagcaagagaggcggaagaggtggaagaggtggggccaggggaggccgtggt
ggtggggccaggggaggccgtggtggcagcagggattttggtggtggaggaagggatttt
ggcagtagcagcgatagaggtggaagaagtggcggtagggattttggtggtcgtcgtggt
ggtgctagcactagtagcagaggtggtaagagaggaggaggaagaggaggtggaggtaaa
cgtgggagaggaagatag
DBGET
integrated database retrieval system
