Arabidopsis thaliana (thale cress): AT1G78650
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Entry
AT1G78650 CDS
T00041
Symbol
POLD3
Name
(RefSeq) DNA-directed DNA polymerase
KO
K03504
DNA polymerase delta subunit 3
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03030
DNA replication
ath03410
Base excision repair
ath03420
Nucleotide excision repair
ath03430
Mismatch repair
ath03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AT1G78650 (POLD3)
03410 Base excision repair
AT1G78650 (POLD3)
03420 Nucleotide excision repair
AT1G78650 (POLD3)
03430 Mismatch repair
AT1G78650 (POLD3)
03440 Homologous recombination
AT1G78650 (POLD3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ath01009
]
AT1G78650 (POLD3)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ath03032
]
AT1G78650 (POLD3)
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT1G78650 (POLD3)
Protein phosphatases and associated proteins [BR:
ath01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
AT1G78650 (POLD3)
DNA replication proteins [BR:
ath03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
AT1G78650 (POLD3)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
AT1G78650 (POLD3)
MMR (mismatch excision repair)
DNA polymerase delta complex
AT1G78650 (POLD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
844201
NCBI-ProteinID:
NP_565185
TAIR:
AT1G78650
UniProt:
Q9SYL7
A0A654ERR9
LinkDB
All DBs
Position
1:29582907..29585665
Genome browser
AA seq
509 aa
AA seq
DB search
MTHTETLNLLDEIESFVSDQLQVVSYKWLSRNFSLSSNTAKRLLKDFVEKHGKGLEVVYI
VSGLLKNGPSDYHARLASSTELPEVEKEFNGKYSVHIYSVQASIPMDPAAIWNTEFVQAE
ELFRQPSATDNCLKGNRFCGVSNSCVKRNIEGATENVTAPRTESVRTTGQSKSSSNFQKS
TVPSNQGKNFQHSSSNVGHQAKSESIAAPAKNQSAKSSLDKEKAFHVPANKKNGQGEKSV
TGTGGLLKNMWGRVPVKTEDDSPTVDVKNHITNHSEPQKPSHDADKKGGSDDETRDANFM
RAPKDNRKRKVIFDFSDDEYEDVISLASPSSPKVNSRPDVELSSEDSGPEKPDADVSPEI
KSEEPEASKEDRQNTASVDASTTLSTEKIQAIGSEAEVNPSKRRTTAVPSSPKRKKVLKS
RIDDRGREVTEVVWEETETNAKKKEDTNTSKKLDDGKTANAVNRAVAQKKSPAIGNTAAT
NAGGKAGSKKGGNVKDPKQGNIMSFFKKV
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgacccacaccgaaaccctaaatctgctcgatgaaatcgagtcttttgtctccgatcag
cttcaagtggtatcttacaaatggctgagtcgaaatttctcgctttcatcaaatacggcc
aagaggttgctcaaggattttgtagagaaacatgggaagggtttggaagttgtatatatt
gtgtccggattgctaaagaacggaccttccgattaccacgcaaggcttgcttctagtacc
gaacttccagaagtagagaaagagttcaatggaaaatattcagtacatatctacagtgtt
caagctagtattccaatggatccagcagccatatggaacactgagtttgtacaagcagaa
gaactcttcaggcagccttctgccactgataattgtttgaaaggcaacaggttttgtggc
gtctccaattcttgtgtgaagcgcaatatagagggagccactgaaaatgttaccgccccg
cgaactgaaagtgtgagaactacaggacaatctaaaagtagttcaaattttcaaaagagt
acagtgccgtcaaaccagggaaagaatttccagcactcaagctctaatgttggccatcag
gctaagagtgaatctattgctgctccagctaaaaatcagtctgcgaaatcctctttggat
aaagaaaaagcttttcatgtgcccgctaataaaaagaatggacagggcgagaagagcgtg
actggaactggtggtttgttgaaaaatatgtggggccgtgtgcctgtgaaaacagaagat
gattctccaacagtagatgtgaaaaatcatattactaatcattcggaaccccaaaaacct
tctcatgatgctgacaagaagggaggcagcgatgatgagactcgagacgccaatttcatg
agagcgcctaaagataacagaaaaagaaaggtgatatttgatttttcagatgacgagtat
gaagatgtaatcagcttagcatctcctagtagtccaaaggttaattcacgtccagatgtc
gaactcagttcggaagattcaggtccagagaagcctgacgcagatgtttctccagagata
aaatctgaggaaccagaggccagcaaagaagacaggcaaaacactgcttctgttgatgct
tctacgactttgtcaacggagaagatccaggccattggttctgaagctgaagtgaatccc
tcaaagagaagaactactgcagttcctagttcgccgaaaaggaaaaaggtgttgaagtca
cggattgatgatcgtgggagagaagtaactgaggtagtgtgggaggagacagaaacgaac
gcaaagaagaaagaggacactaatacaagtaagaagttagatgatggcaaaaccgcaaat
gctgttaacagggcggttgcacagaagaagagtccggccattggaaacacagcagcgaca
aacgcaggaggaaaagcgggaagcaagaaaggaggaaacgtcaaagatccaaagcaaggg
aatataatgtccttcttcaagaaagtttaa
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