Arabidopsis thaliana (thale cress): AT1G78720
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Entry
AT1G78720 CDS
T00041
Name
(RefSeq) SecY protein transport family protein
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03060
Protein export
ath04141
Protein processing in endoplasmic reticulum
ath04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AT1G78720
04141 Protein processing in endoplasmic reticulum
AT1G78720
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
AT1G78720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT1G78720
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ath02044
]
AT1G78720
Membrane trafficking [BR:
ath04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
AT1G78720
Secretion system [BR:
ath02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
AT1G78720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
Motif
Other DBs
NCBI-GeneID:
844208
NCBI-ProteinID:
NP_001319405
TAIR:
AT1G78720
UniProt:
Q9ZV90
A0A654EQ54
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All DBs
Position
1:29605457..29607678
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AA seq
475 aa
AA seq
DB search
MVGGFRVIHLVRPFLAFLPEVQSPERKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
ADPFYWMRVILASSRGTVMELGITPIVTSGMVMQLLAGSKIIEIDNNVREDRALLNGAQK
LLGILIAVGQAVAYVLSGMYGSVGELGVGNAILIIVQLCFAAIIVLCLDELLQKGYGLGS
GISLFIATNICESIIWKAFSPTTINSGRGAQFEGAVIALFHLLITRTDKVRALREAFFRQ
NLPNVTNLHATVLIFLIVIYFQGFRVVLPVRSKNARGQRGSYPIKLFYTSNMPIILQSAL
VSNIYFISQILYRKFGGNFLVNLIGTWKESEYSGQSIPVGGIAYYITAPSSLAEMATHPF
HALFYLVFMLAACALFSKTWIEVSGSSAKDVARQLREQQMVMPGHRDSNLQKELNRYIPT
AAAFGGLCIGALTVLADLMGAIGSGTGILLAVTIIYQYFETFEKEKASELGFFGL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggtaggagggtttagagtgattcatcttgtgagaccgttccttgcattcttaccagaa
gtccaatctccagaaaggaagattccgtttagagagaaagtcatatacactgtgatctct
ctcttcatcttcttggtttgtagtcaattgccactttatggaatccattccactacaggc
gcggatccattctattggatgcgcgtcattcttgcttcaagccgaggtactgttatggag
cttggtattacaccaatcgtcacctccggaatggttatgcagcttcttgctggttccaag
atcattgaaatcgataacaatgtccgtgaagaccgtgcactcttgaatggtgcacagaag
ctgttgggaatcctcatcgcggttggccaagcagttgcatatgttctctctgggatgtat
ggtagtgttggggaactaggagttggtaatgctattcttatcatagttcagctctgtttt
gctgccattatcgttctttgtttagatgagcttcttcagaaaggttatggcctcggttct
ggtatttcccttttcattgctactaatatctgtgaaagcattatatggaaagcattcagt
cctacaaccatcaacagtgggcgtggagctcaatttgaaggagctgttattgctcttttc
caccttctcattactcgaacggataaagtccgcgcacttcgtgaagcgtttttcaggcag
aaccttcccaatgtgacgaatctgcatgccacagtcttgatctttctgatagtgatttac
tttcaaggctttcgggtagttttaccagtgagatcaaagaatgctcgtggacaacgaggc
tcttatcctatcaaattgttctacacctccaacatgcctatcatcttgcagtcagctctt
gtttccaatatctacttcatctctcagatattatacagaaagtttggtgggaactttttg
gtgaacttaatcggtacgtggaaggagtcagaatacagcgggcaatctatccccgttggt
ggtattgcgtactacataaccgctccgtcaagcttagctgagatggcaactcatcctttt
cacgctctgttctatcttgtgttcatgttagccgcgtgtgcgttgttctctaaaacctgg
attgaagtctccggttcatcagccaaagatgtcgccagacaactaagagaacagcaaatg
gtaatgcctggtcaccgagactcaaaccttcaaaaggaactgaaccgatacattcccacg
gctgcagcttttggtggtctgtgtatcggtgcactcactgtcttggctgatttaatggga
gctattgggtcaggcactggaatccttcttgcggttacaatcatatatcagtatttcgaa
accttcgaaaaagaaaaagcaagcgagctaggtttcttcggtttgtaa
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