Arabidopsis thaliana (thale cress): AT1G79350
Help
Entry
AT1G79350 CDS
T00041
Symbol
EMB1135
Name
(RefSeq) RING/FYVE/PHD zinc finger superfamily protein
KO
K26273
protein strawberry notch
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ath03036
]
AT1G79350 (EMB1135)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
AT1G79350 (EMB1135)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
Zn_ribbon_FGT1_1
Zn_ribbon_FGT1_2
SBNO
PHD
ResIII
DUF349
PHDvar_NSD
Zot
PHD_4
Motif
Other DBs
NCBI-GeneID:
844273
NCBI-ProteinID:
NP_178053
TAIR:
AT1G79350
UniProt:
F4IF36
LinkDB
All DBs
Position
1:complement(29844621..29853466)
Genome browser
AA seq
1295 aa
AA seq
DB search
MTQSPVQPPPPLPAQPHSAAGGVIRGDVQVRCAGCRVILRVKTGVVEFSCPTCQLPQMLP
PELLSRARPQFPQSPQQPPQPIQTLPPPIQQQLKPLNLPRPPVPAHGIDPTKMQLPCANC
QAILNVPHGLTRFSCPQCHVELAVDVSKLNRSLTASQSHSNPPTPAAPTVPPPPPPEEVN
EEAIEVEREEDEGGTAGETFMDYRPPKLSIGPPHPDPIVETSSLSAVQPPEPTYDLKIKE
ELERSKALSCLQIETLVYACQRHLQHLADGTRAGFFVGDGAGVGKGRTIAGLIWENWKHG
RRKALWISIGSDLKYDARRDLDDVGATCVGVNPLNKLPYSKLDSKNVGIKEGVVFLTYNS
LIASSEKGRSRLQQLVQWCGPEFDGLLIFDECHKAKNLVPEAGSQPTRIGQAVVDIQDKI
PQARVIYCSATGASEPRNMGYMVRLGLWGAGTSFSDFNKFLGALDKGGTGALELVAMDMK
ARGMYVCRTLSYKGAEFEIVEARLEAGMEAMYNKSAEFWAELRIELLSASAFLPNEKPNS
SQLWRLYWSSHQRFFRHLCMSAKVPVTVRLAKKALSTNKCVVIGLQSTGEARTEEAVNKY
GLELDDFVSGPRELLLKFVEENYPLPEQPEPLSEDDSVKELQRKRHSASPGVSIRGRVRK
MAKWKPDSDNESDLESEADSADDSNDSDDEFQICQICSGEDERKKLLHCSECDKLFHPDC
VVPPVIDLPSEAWICFSCKEKTEEYIQARRLYIAELQKRYEAALERKSKIIEIIRSLNLP
NNPLDDIVDQLGGPEKVAEMTGRRGMLVRASNGKGVTYQARNTKDITMEMVNMHEKQLFM
DGKKLVAIISEAGSAGVSLQADRRAVNQKRRVHLTLELPWSADRAIQQFGRTHRSNQTSA
PEYRLLFTNLGGERRFASIVAKRLETLGALTQGDRRAGPSGPSLSAYNYDSNFGKKSLMV
MYRGIMEQEKLPVLPPGCSIDEPETVKEFLTKARAALVAVGIVRDSVLANGKDVGRFSGR
IIDSDMHDVGRFLNRLLGLPPDIQNRLFELFTSILDVLVHNARIEGSFDSGIVDMKANSV
ELLSTPKTVHVDQMSGASTMLFTFTLDRGVTWESASSMLEGKRRDGLGSANDGFFESKRE
WLGRRHFILAFESAASGLFKIVRPAVGESIREMSLSELKTKYRKLSSLEKARTGWEDEYE
VSSKQCMHGPKCKLGEYCTVGRRIQEVNVVGGLILPIWGTIEKALSKQARHSHKRIRVIR
IETTTDNQRIVGLSIPNAAVETVLQDLAWVQEIDD
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagtcgcctgttcaaccgcctccgccgctcccagctcagccgcattccgccgcc
ggaggtgtaataagaggcgatgtacaggttaggtgcgcaggctgtcgcgtgattctgagg
gtgaaaaccggcgttgtggagttctcgtgtccgacttgtcaacttccccaaatgttgccg
ccggagcttctttctagggcacggccgcagtttccgcagtctccacaacaaccaccacag
ccaattcagacgcttccgccaccgattcaacagcagcttaagcctcttaatctacctagg
cctccggttccggcacatggaatcgatccgacgaagatgcaattgccttgcgctaactgt
caggctatcctcaatgtgcctcatggactcactcggttctcgtgtcctcagtgccatgtc
gagctcgctgttgatgtctccaagcttaatcggtctttaactgcttctcaatctcattct
aatcctcctactcctgctgctcccacagtcccgcctccgcctcctcccgaagaagtcaat
gaggaagctattgaagtggagagagaagaagatgaaggtggaacggctggagaaacgttt
atggattatcgtcccccaaaactttcgatcggacctcctcatcctgatccaattgtggaa
acatcatctctatctgcagtgcaacccccagagcctacttatgatctcaaaatcaaggaa
gagcttgaaaggtcaaaggctttatcgtgtttgcagattgagacattagtttacgcttgc
cagaggcatctccagcaccttgctgatggtaccagagcaggcttttttgttggagatggt
gctggtgtgggcaaagggcgaacaattgccgggttgatttgggaaaattggaaacatgga
aggaggaaagctttgtggatttctattggctcagacttgaaatatgatgcaagaagggac
ttggatgatgtgggtgctacatgcgttggagtgaatcctttgaacaagctaccctattct
aagcttgactcgaaaaatgttggtattaaagaaggagtggtattcttgacatacaatagc
ctcattgcttcctctgagaagggccgttctcgtttacagcagcttgttcaatggtgtgga
ccagaatttgatggtctcttgatctttgatgagtgccataaagcgaaaaatttggtacct
gaagctgggagtcagccgacacgcatcggacaggcagttgttgacattcaggataagatc
ccccaagcacgtgttatttattgctcggctactggggcatcagaaccacgaaacatgggt
tatatggtcaggcttggtctttggggagctggaacaagttttagtgattttaacaaattc
ctaggtgcccttgataaaggtgggacaggagcgttggaattggttgccatggatatgaaa
gcgagggggatgtatgtatgccgaaccctgagttacaaaggggctgagtttgagattgtt
gaagctcgtttagaagcaggaatggaggcaatgtacaataagtctgcagaattttgggca
gagctacggatagagttgttgtcagcaagtgcttttctccctaacgagaaaccaaattct
agtcagttgtggagattatactggtcaagccaccagcgtttctttagacacctgtgtatg
tcagctaaagtccctgtaactgtgaggttagctaagaaagccttgtcaacaaacaagtgt
gtagttattggccttcagagtactggagaggctcgaaccgaagaggctgtaaataaatat
ggtcttgagcttgatgattttgtctcgggacctcgagagctcttgttgaaatttgtggaa
gagaattatcccttacccgagcagcctgaacctctgtcagaggatgatagtgttaaagaa
cttcagaggaagaggcattcagcttcacctggtgtttcaattagagggagagtaagaaag
atggcaaagtggaaaccagatagtgataatgaaagtgatttggagtctgaagctgactct
gctgacgattctaatgattctgatgatgagttccagatatgtcagatatgcagtggggaa
gatgaaaggaagaagttgctccattgttctgaatgtgacaagctttttcatccggactgt
gtggttcctccagttatagacttaccatctgaagcgtggatttgcttttcttgtaaggaa
aagacagaggagtacattcaagcaagacgtctttacattgccgaattgcagaaaaggtat
gaagcagcgcttgaacgaaaatcaaagatcatagagatcatccgttctctgaatcttcca
aacaatcctttggatgacatcgtcgatcagcttggaggccctgaaaaagttgcagaaatg
acgggcaggcgaggtatgcttgtaagagcatcgaatgggaaaggtgttacatatcaagca
agaaacacaaaggatattaccatggaaatggtcaacatgcacgagaagcaactatttatg
gatggtaaaaagttggttgccattatttctgaagctgggtcagctggtgtttcgttgcaa
gcagatagaagggcagtaaatcagaaaagaagggttcacttgactttagagcttccctgg
agtgctgatcgtgcaattcagcaatttggaagaactcaccggtcaaatcagacatctgca
cctgaatatagactactcttcactaatctcggtggggaacgccgctttgcctctattgtt
gcaaagagactagaaacacttggtgctttaacacagggagaccgcagggctgggccctcc
gggccttctttgagtgcgtataattatgatagtaactttggtaaaaaatccttgatggtg
atgtatcgaggcataatggagcaggagaaactacctgttcttcctcctggatgctcgatt
gatgaacccgaaacagttaaagagtttttgaccaaggcaagggctgctcttgttgcggtt
ggaattgttagggacagtgttctggccaatgggaaagatgttggaaggttttcaggacgt
attattgattctgacatgcatgatgttggacgatttttgaatcgcctcttaggattgcca
cctgatatccagaataggctgtttgaattgtttactagtatattagacgttcttgtacat
aatgctcggatagaaggaagttttgactcaggaattgtggatatgaaagctaatagtgtt
gagctactgagcactccaaagaccgtccatgttgatcaaatgtctggtgcctcaactatg
ctctttacttttactctagatcgtggtgtaacatgggagtctgcgagttcaatgctagag
ggaaagagaagggacgggcttggttcagctaatgatggcttttttgaatctaaaagggaa
tggttaggaagacggcacttcatattagcatttgagagtgccgcttctgggttgtttaag
attgtacgtcctgctgtaggagagtcgatcagggagatgtctctttcagagttgaaaact
aaataccgaaaactatcttctctggagaaggctcgtactggttgggaggacgagtacgaa
gtttcatcaaaacagtgtatgcatggacccaagtgtaagcttggggagtattgcacggtt
ggacgtaggatacaggaagtaaacgttgtgggtggccttattcttcccatctggggaacc
atcgagaaagctctctccaaacaagcccgtcacagccacaagagaattcgagttatacgc
atagagactacgacggataatcagcggatagtgggcctctccatcccaaatgcagctgta
gaaactgttttacaagatttagcatgggttcaagagattgatgattaa
DBGET
integrated database retrieval system
