Arabidopsis thaliana (thale cress): AT1G79590
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Entry
AT1G79590 CDS
T00041
Symbol
SYP52
Name
(RefSeq) syntaxin of plants 52
KO
K08503
syntaxin of plants SYP5
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
AT1G79590 (SYP52)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT1G79590 (SYP52)
Membrane trafficking [BR:
ath04131
]
SNARE
SNAP-25[C] (Qc)
STX8
AT1G79590 (SYP52)
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Paralog
GFIT
Motif
Pfam:
SNARE
HAUS1
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
844297
NCBI-ProteinID:
NP_565213
TAIR:
AT1G79590
UniProt:
Q94KK7
A0A654ES17
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All DBs
Position
1:29946185..29948807
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AA seq
233 aa
AA seq
DB search
MASSSDPWMREYNEALKLSEDINGMMSERNASGLTGPDAQRRASAIRRKITILGTRLDSL
QSLLVKVPGKQHVSEKEMNRRKDMVGNLRSKTNQVASALNMSNFANRDSLFGTDLKPDDA
INRVSGMDNQGIVVFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIDDLDY
DVDITDSRLRRVQKSLALMNKSMKSGCSCMSMLLSVLGIVGLALVIWLLVKYL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttcttcggatccatggatgagagagtacaatgaggctttgaaactctctgag
gatattaatggcatgatgtctgaaaggaatgcctccgggttaaccgggcctgatgctcaa
cgtcgtgcctctgcaattcgaagaaagatcaccattttggggactcgattagacagtctg
caatcccttcttgtcaaggttcctggcaagcagcatgtttcggagaaagagatgaatcgt
cgcaaggatatggttgggaatttgagatcaaaaacaaatcaggtggcctctgctttgaat
atgtcaaactttgcaaacagagacagcttgtttggaacagatttaaagccggatgatgcg
ataaatagagtctctggcatggacaaccaaggaattgttgtatttcaacggcaagttatg
agagaacaagacgagggacttgagaagttggaggaaacagtcatgagtaccaaacacatt
gctctcgctgttaacgaggagctcaccctgcagacaaggcttattgatgacttagattac
gatgtggatatcactgactctcgcttacggcgtgttcaaaagagccttgccttgatgaac
aagagcatgaaaagtggttgctcatgcatgtctatgctcttgtctgtgcttggaatcgtt
ggtcttgctcttgtaatttggctgctggttaagtacctgtaa
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