Arabidopsis thaliana (thale cress): AT1G79890
Help
Entry
AT1G79890 CDS
T00041
Name
(RefSeq) RAD3-like DNA-binding helicase protein
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ath03036
]
AT1G79890
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AT1G79890
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
AT1G79890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
AAA_11
HEXIM
Motif
Other DBs
NCBI-GeneID:
844328
NCBI-ProteinID:
NP_001321115
TAIR:
AT1G79890
UniProt:
A0A1P8APW6
LinkDB
All DBs
Position
1:30048519..30052203
Genome browser
AA seq
855 aa
AA seq
DB search
MTEIREFPAFPYKPYSIQIDFMNALYQFLDKGGVSMLESPTGTGKSLSIICSALQWLTDR
KEKRNSGLTEESHKVDGNDDEDEPDWMRNFTLNEADGANGDKSIKNTKSPFSLRKHAKEV
FTEGEKADELNDQEFLLDEYESQDESSPGGGNSKRKPARGFDSSSSEDEEDENDCSDDEQ
GGFKVFFCSRTHSQLSQFVKELRKTVFAKKLKVVCLGSRKNLCINEDVLKLGNVTRINER
CLDLQKKKISQVSKKKNLGANVRIVRTKASCRCPMLRKHKLQREFKAESFQQEAMDIEDL
VQLGREMRTCPYYGSRRMAPAADLVILPYQSLLSKSSRESLGLSLKNSVVIIDEAHNLAD
TLLSMHDAKLTVSQLEDIHCSIESYLGRFQNLLGAGNRRYIQIMLILTRAFLKPLASDRN
LSSVNVGLDTENPSKSKPCGACSMAIYDFLFSLNIDNINLVKLLAYIKESNIIHKVSGYG
ERVAAMLQKDPVAHEEMSKLTSFRAFSDMLVALTNNNGDGRIIISRTSSSTSGQHGGYIK
YVMLTGAKLFSEVVDEAHAVILAGGTLQPIEETRERLFPWLPSNQLQFFSCSHIVPPESI
MPIAVSHGPSGQSFDFSHSSRSSIGMIQELGLLMSNLVAVVPEGIIVFFSSFEYETQVHT
AWSNSGILRRIVKKKRVFREPRKNTEVEAVLRDYKEAIESERGAIMLAVVGGKVSEGINF
SDSMCRCVVMVGLPYPSPSDIELLERIKHIEGRADSDSIKPSVTLVDDSYYSGDVQAGFG
VLKSCKRRGKEYYENLCMKAVNQSIGEFVVSTICDDISGGCVLLIDNGTETECSSRLVFQ
VGQSDTKRTMHPFYW
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgacggagatacgagagttcccggcgtttccatacaagccgtactcgatccagatcgat
ttcatgaatgcgctctatcaatttctcgataagggaggcgtctccatgctcgaaagcccc
actgggactggaaaatctctaagcattatctgcagtgctctccagtggcttactgaccgc
aaggagaaacgaaactcaggattgaccgaagaatcccataaggttgatggaaacgatgat
gaggacgagcccgattggatgaggaattttactctcaacgaagcagatggagccaatggt
gacaagagcatcaaaaacaccaaatccccattttctctcaggaagcatgctaaggaagtt
ttcacggaaggggaaaaggctgatgagctaaacgatcaagaatttttgttggatgaatac
gaaagccaagatgaatcatctccgggcggaggcaactctaaaagaaaacctgcccgaggt
tttgacagtagttcatcagaggatgaggaagatgagaatgactgctcggatgacgaacaa
ggaggcttcaaggttttcttttgcagccgcacacattcacagctttcccagtttgtcaag
gagttgagaaagactgtctttgccaaaaaactcaaagttgtgtgtctcggctcccgaaag
aacttgtgcataaacgaagatgttcttaagcttgggaatgtgacccgaatcaacgagagg
tgcttggacttgcaaaagaagaagatatctcaagtctctaaaaagaagaatttaggtgca
aatgtaagaatagtacgaaccaaagcttcttgcagatgcccaatgcttagaaaacataaa
ctacagagagaattcaaggctgagagttttcaacaagaagccatggacattgaggatctt
gttcagcttggacgagagatgagaacttgtccatactacggttctagaagaatggccccg
gcagctgatcttgttattcttccatatcaatctcttctatcaaagtcgtcacgagaatct
cttggcctaagcttgaaaaatagtgttgttatcatagacgaggctcacaatttggctgac
actcttctcagtatgcacgatgcaaaactaacagtgtcacagttggaggatatacattgc
agcatagagagttatctgggaagattccagaatctcttgggagctggaaacaggagatat
atccaaattatgttgattcttacccgagctttcctcaaacctcttgctagtgataggaat
ctgagtagcgtaaatgttggtcttgatactgaaaacccctctaaaagcaagccttgtggt
gcttgttcaatggcaatatatgactttttgttttctctcaatatagacaatataaatttg
gtcaagttactcgcctatataaaggaaagcaatatcattcataaggtcagtggatatgga
gagagagtcgctgctatgttgcagaaagatccagtggctcatgaagaaatgagcaagtta
acaagttttagagcgttttctgatatgttggtggcgctcactaataacaatggtgatggg
cggataataatctcaaggacgagttcgtctacctctggccaacatggagggtacattaaa
tatgtcatgctcactggagcgaagttattttcagaggtggtggatgaagcgcatgctgtc
atattggccggtgggactcttcaacctatagaagagacaagggaacgactctttccatgg
ctaccatcaaatcagctgcagttcttctcatgtagtcacattgttcctcctgagagcata
atgccaattgcagtttcacatggtccttctggtcagtcttttgactttagccacagttca
agaagctcaataggaatgatacaggagttaggactcttaatgagcaaccttgtggcagtg
gttcctgaaggaattatcgtcttcttctcctcctttgagtatgaaacacaggtgcacaca
gcgtggagtaactcagggatactcagaagaatagtgaagaagaagcgtgtgttcagagaa
cccaggaaaaacactgaagtagaagctgttctcagagattacaaggaagcgatagaaagc
gaaagaggggcaataatgctagctgtggttggtgggaaggtgtcagaaggaatcaacttc
agcgacagcatgtgtcggtgtgttgtgatggttggtttgccgtatcccagcccgtctgac
atagagttgttagagagaataaagcatatagaaggtcgtgcagattcagattccataaaa
ccttctgtgactttggttgatgattcttactacagtggagatgttcaagcaggatttggc
gtgttaaagagctgcaaacggagagggaaagaatactatgaaaatctgtgtatgaaagca
gttaaccaatcaatcggtgagtttgtggtttcaactatatgtgacgatataagtggaggt
tgtgttttattaattgataatgggactgaaacagaatgttcttcccggcttgtttttcag
gtagggcaatcagacacgaaaaggactatgcatccattttactggtag
DBGET
integrated database retrieval system
