KEGG   Arabidopsis thaliana (thale cress): AT1G79990
Entry
AT1G79990         CDS       T00041                                 
Name
(RefSeq) coatomer subunit beta-2
  KO
K17302  coatomer subunit beta'
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT1G79990
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT1G79990
Membrane trafficking [BR:ath04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    AT1G79990
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   AT1G79990
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_WDR41 DSE1_N Beta-prop_RIG_2nd ASA1 CFAP251_N NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_Nup120_160 Beta-prop_VPS8 Beta-prop_DCAF4 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_ACSF4 Beta-prop_SPT8 TPR_CcmH_CycH Beta-prop_WDR35_TULP_N CFAP70_mid_TPR WD_LRWD1 Beta-prop_DCAF12 TPR_2 TPR_12 TPR_8
Other DBs
NCBI-GeneID: 844339
NCBI-ProteinID: NP_001154478
TAIR: AT1G79990
UniProt: Q9CAA0 A0A178WGE9
LinkDB
Position
1:30085750..30092239
AA seq 920 aa
MPLRLEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSIMVKLG
REIPVASMDNSGKIIWAKHNEIHTVNIKSVGADEVTDGERLPLAVKELGTCDLYPQSLKH
NPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEHAVRESSTKIKIFSKNFQE
KKTVRPTFSAEHIFGGTLLTMCSSDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAIA
SDTSFYILKFNRDIVSSYFDGGKQIDEEGIEDAFELLNETNERVRTGLWVGDCFIYTNSS
WRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKEFNVIGYTLLLSLIEYKTLVMR
GDLEQANEVLPSIPKEHHNSVAHFLESRGMTEDALEVATDPDYRFELAIQLGRLAVAKDI
AVEAQNESKWKQLGELAMSSGKLDMAEECMRHAMDLSGLLLLYSSLGDADGMMKLAALAK
EQGKNNVAFLCLFMLGQVEDCLHLLVESNRIPEAALMARSYLPSKVSEIVALWRNDLTKI
SPKAAESLADPEEYPNLFEEWQVALSLENRAAETRGVHPPAGDYCSHADRDHTTLVDAFR
IMQIEEEGRLEQGDVLDEVGEEGEDGEEEEEEDRQEESSDGRQQNVEEEAVVVDADSTDG
AVLVNGNESEEQWVLTPPQE
NT seq 2763 nt   +upstreamnt  +downstreamnt
atgccactgagactcgaaatcaagcgtaagtttgctcaaagatcagaaagagtcaaatct
gtagatctccatccaacagagccatggatcctggcaagtttgtattccggaactctgtgc
atctggaattaccagacccagacaatggtaaaatctttcgacgtgactgaattgcctgtt
cggtcagcaaagttcattgcacggaagcagtgggttgtagctggagctgatgacatgttt
attcgtgtctacaactacaacactatggataagatcaaagtatttgaggctcatgctgat
tacattcgctgtgttgctgttcatcccacgcttccctatgtcttatcatcatctgatgat
atgctcatcaagctctgggactgggaaaagggttggctttgcactcaaattttcgaaggc
cattcccattatgttatgcaagtcactttcaaccccaaagacaccaatacttttgctagt
gcatcccttgaccgtaccataaaaatatggaatcttggctctccggatccaaattttact
ttggatgcacatctcaaaggggtaaactgtgtagactactttactggtggggataaacca
tacctaatcactggttctgatgatcatactgctaaggtgtgggattaccaaacaaagagt
tgcgttcagactctcgaaggtcatacacacaatgtttctgcagtatcttttcatccagag
ctacctataattattacaggatccgaggatggaactgttcgcatatggcacgccaccact
tacaggcttgagaatacattgaactatggccttgagagggtttgggctattggacacatt
aaaggttcacgccgggttgtaattggttatgacgaaggatccataatggtgaaacttggc
cgtgaaataccagtggctagtatggataacagcggaaaaattatttgggctaaacacaat
gagatacatactgtaaacatcaagagtgtgggcgcagatgaggtcactgatggtgagaga
cttcctttggccgttaaagagctagggacctgcgatctttatcctcaaagcttgaagcac
aaccctaatggtaggtttgtggtagtttgtggagatggtgagtatattatctacactgcc
ttggcgtggcgaaataggtcatttggctctgcgctagaatttgtttggtcatctgatggg
gagcatgctgtcagggaaagctcgacaaagatcaagatcttcagcaagaatttccaggaa
aagaagactgtgagacccaccttctcagcagagcacatttttggtgggacgttattgaca
atgtgctcaagtgattttatatgcttctatgattgggcggaatgtaggttgattaggcga
atagatgttactgtcaaaaatctttattgggcggacagtggtgatctagttgcaattgcc
agtgatacatcattctacatccttaagttcaatcgtgacattgtttcctcttattttgat
ggcggtaaacaaattgatgaggaaggcattgaggacgcatttgagcttctcaatgaaacc
aatgaacgtgttcggactggcttatgggttggggattgttttatctataccaactcttct
tggaggcttaattactgtgttggtggtgaggtaactacaatgtatcatctggaccgtcct
atgtacttgttgggttatctcgctaatcaaagcagggtttatttgattgacaaagagttc
aatgttattggatacactttacttttaagtttgattgagtacaagactcttgtgatgcgt
ggagatttggaacaggctaatgaagtcttaccttcaattcctaaggagcaccataatagc
gtggcacactttttggagtcacgtggcatgacagaagatgctctagaagtagcaactgat
cctgactacagatttgagttggccatacagctcggtagattggctgtcgcaaaggacatt
gctgtagaggcacaaaatgaatctaaatggaagcaacttggagaattagctatgtcaagt
gggaagctggatatggctgaggaatgcatgaggcatgctatggatttgagtggtctgctg
ctgctttattcttcattgggagatgcagatggaatgatgaagctggcagcacttgcaaaa
gagcaaggaaagaacaatgtcgcttttctttgcttgttcatgttgggtcaagtagaagac
tgcctgcatctgttggtggaaagtaatcgaatacctgaagccgctctgatggcgagatcg
taccttccaagcaaggtctccgaaatagtggcattgtggagaaacgatttgaccaagata
agtccaaaggctgctgaatctctggctgatcccgaagagtatcccaatctctttgaggag
tggcaagtcgccctgtcccttgaaaatagagctgcagagacgaggggcgtccatcctcct
gctggggattattgtagtcatgcagacagagatcatacaactttagtggatgcttttaga
attatgcaaatagaggaagagggtcgacttgagcaaggggatgttctcgacgaggttggg
gaagagggggaagatggagaggaagaggaggaggaggatcgtcaggaagagagtagtgat
gggagacagcagaatgtggaagaagaggctgttgtggtggacgctgactctacggatggt
gctgtgctagttaatggtaacgagtctgaagaacagtgggttctaacaccgccacaagag
tag

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