Arabidopsis thaliana (thale cress): AT1G80670
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Entry
AT1G80670 CDS
T00041
Symbol
RAE1
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
KO
K14298
mRNA export factor
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AT1G80670 (RAE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT1G80670 (RAE1)
03036 Chromosome and associated proteins [BR:
ath03036
]
AT1G80670 (RAE1)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AT1G80670 (RAE1)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AT1G80670 (RAE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_BBS7
Beta-prop_NUP159_NUP214
GH18_BT1044-like
Motif
Other DBs
NCBI-GeneID:
844406
NCBI-ProteinID:
NP_178182
TAIR:
AT1G80670
UniProt:
Q38942
A0A178WNI0
LinkDB
All DBs
Position
1:complement(30320525..30323902)
Genome browser
AA seq
349 aa
AA seq
DB search
MATFGAPATANSNPNKSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGAS
LASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAM
AWIPGMNLLATGSWDKTLKYWDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVF
NLQNPQTEFKRIQSPLKYQTRCVTAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKCH
RDGNDIYSVNSLNFHPVHGTFATAGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSSFNHDG
SIYAYAACYDWSKGAENHNPATAKSSIFLHLPQESEVKAKPRVGATGRK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttttggtgcgcctgctaccgccaacagtaaccctaacaaatcctacgaggtt
actccatcaccggcagattctatttcgagcttaagttttagtccaagagctgatatactt
gtggccacttcatgggacaatcaggtgaggtgttgggaaatatcccgtagtggagcctct
ctagccagtgctcctaaagcatcaatatcacatgatcagccggttttatgttctgcttgg
aaagatgatggaaccacagtctttagcggtggatgtgataagcaagcaaaaatgtggccc
ttgttgtctggtggtcaacctgtaactgttgctatgcatgagggtcctatcgcagctatg
gcttggatcccgggaatgaatctccttgcaactggaagttgggataaaactttgaaatat
tgggacacaagacagcaaaatcctgtacatacccaacagcttccagacaaatgttataca
ttgtctgtgaaacatcctctgatggttgtcgggactgccgatagaaatctgatagtcttc
aacttgcaaaatcctcagactgagtttaagagaatccaatccccactgaagtaccagacg
aggtgtgttactgccttccctgatcagcaaggttttttggttggttcaattgaggggcgg
gttggtgttcatcatctggatgattctcaacagagcaaaaacttcacattcaaatgccac
agagatggaaatgatatatattctgtcaactctctgaatttccacccggtacatggcact
tttgcaactgctgggtcagatggtgctttcaatttctgggacaaagatagtaaacaaaga
ctcaaggccatgtcgaggtgcaatcagccaattccatgcagctcgttcaaccacgatgga
tcgatatatgcatatgcggcttgctatgactggagcaaaggtgcagaaaatcacaacccg
gcgactgcaaaaagcagcattttcttgcacctgccacaggaaagcgaggttaaggccaag
ccaagagttggagcaaccggcagaaaatga
DBGET
integrated database retrieval system
