Arabidopsis thaliana (thale cress): AT1G80680
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Entry
AT1G80680 CDS
T00041
Symbol
SAR3
Name
(RefSeq) SUPPRESSOR OF AUXIN RESISTANCE 3
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AT1G80680 (SAR3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT1G80680 (SAR3)
03036 Chromosome and associated proteins [BR:
ath03036
]
AT1G80680 (SAR3)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AT1G80680 (SAR3)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AT1G80680 (SAR3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
DUF3144
Motif
Other DBs
NCBI-GeneID:
844407
NCBI-ProteinID:
NP_178183
TAIR:
AT1G80680
UniProt:
Q8LLD0
LinkDB
All DBs
Position
1:30323882..30328880
Genome browser
AA seq
1046 aa
AA seq
DB search
MTSLSIQPFPEISRMARDLDSRKKRRISLDGIAALCEHSKEIIDSLPMLNSPDYFLKPCI
NELVEREIESPDYCSRVPDFTIGRIGYGYIRFLGNTDVRRLDLDHIVKFHRHEVIVYDDE
SSKPVVGEGLNKAAEVTLVVNIPDLTWGKQQVNHIAYKLKQSTERQGATFISFDPDNGLW
KFFVPHFSRFGLSDDEAEDIAMDDAPGLGDPVGLDGKKVADIDEEDQMETSELELSHSLP
AHLGLDPEKMKEMRMLMFPNEDEDESEDFREQTSHLMTSLTKRNVRPSQKIAQRNSHQDP
PPVVRKTPLALLEYNPGNDKSSPGSILMVQQNKNLAVRKSKTGGFELDISHVTPLTDNYS
RNVVDAALFMGRSFRAGWGPNGVLFHTGKPICSSSSQMVLSSVINKEKIAIDKVVWDRKG
KVQKELIDSAFEAPLSLHKELNHVEEEVRFGSFSLKLQNVVTDRVVLSDICRSYIGIIEK
QLEVAGLSTSAKLFLMHQVMVWELIKVLFSERQSTERLMYAASDNEEDVMQDVKEDSAKI
DTEALPLIRRAEFSCWLQESVSHRVQEDVSDLNGSSYLEHLFFLLTGRELDSAVELAISK
GDVRLACLLSQAGGSTVNRNDILQQLHLWRRNGLDFNFIEKERIKLYELLAGNIHDALQD
FTIDWKRFLGLLMWHHLPPDSSLPIIFRSYQLLLNQAKAPWPVPIYIDEGPADGFVSDNK
HSDILYYLMLLHSKEEEEFGFLQTMFSAFSSTDDPLDYHMIWHHRGILEAVGAFTSDDLH
TLDMGFVAQLLSQGLCHWAIYVVLHIPFREDHPYLHVTVIREILFQYCETWSSMESQRQF
IKDLGIPSEWMHEALAVYYNYHGDFVKALDQFIECANWQRAHSIFMTSVAHSLFLSANHS
EIWRIATSMDDRKSEIENWDLGAGIYMSFYLLKSSLQEDADTMVELEPLDSTNESCRNFV
GRLNESLAVWGDRLPVEARVAYSKMAEEICDLLLSDLSKNPSRETQLTCFETAFDAPLPE
DVRSTHLQDAVSLFSLYLSETGQISA
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctctttctattcaaccatttccagagatttcaaggatggctagagatttggac
tcgcgaaagaaaagaaggatctctttagatggaattgctgccttgtgtgagcattccaaa
gagatcattgattcattgcctatgttgaattctcctgactacttcttgaagccatgtata
aacgagctggttgagcgagaaattgaaagccctgattattgcagccgggttcctgatttt
actattggcaggattggttacggttatattaggtttcttggaaacacggatgttagaagg
ttggacctggatcacatagttaagtttcataggcacgaggttattgtttatgatgatgag
agctccaagccggttgttggtgagggacttaacaaggctgctgaggtgactctggtcgta
aacataccagatctaacttggggaaaacagcaagttaaccatattgcttataaattgaaa
cagagcacggaaagacaaggagcaactttcatctcatttgatcccgataatggtttatgg
aagttcttcgttcctcatttcagcagatttgggttgagtgatgatgaggcagaagatatt
gcaatggatgatgcgccaggtttgggagatcccgtaggactggatggtaaaaaggtagct
gacattgatgaagaagatcagatggaaacttcggagctagagctttctcattctctccca
gctcatttaggacttgatcctgaaaagatgaaagaaatgagaatgctgatgtttcctaat
gaagatgaagacgaaagtgaggactttagagagcaaacttcccatcttatgacatccttg
actaaacgaaatgtaagaccttcgcagaaaattgctcaaagaaatagtcatcaagaccct
ccaccggtcgtgcgcaaaactccgcttgctttgctggagtataaccctggtaatgataaa
agctccccaggtagtatcctgatggtacaacaaaataagaatttggcagtgagaaagtcg
aaaacgggaggtttcgagctggacatcagccatgtcacaccgttaactgataactattcc
cgcaatgttgttgatgcagcattattcatgggaagatcgttccgagcaggttggggccca
aatggcgttctttttcacactggtaagccaatatgtagctccagttcccagatggtattg
tcttctgtgatcaataaagaaaagatagcaattgacaaagtggtttgggatagaaaggga
aaagttcagaaagaacttattgattctgcgtttgaggctcccttaagtctccacaaggaa
ttgaatcatgtagaagaagaagttaggtttggctctttcagtcttaaacttcagaatgtt
gtcaccgatcgtgtagttctttcagatatctgccgaagttatattggtataatcgagaaa
cagctggaagttgctgggttgtccacatctgcgaagctgtttttaatgcaccaagtcatg
gtctgggaactcataaaagttctcttttctgagagacagagtactgaacgtttgatgtat
gcagcttctgataacgaggaagacgtgatgcaggatgtgaaggaagattctgcaaaaatt
gatacagaagctcttccgcttatccgaagagcagaattcagttgttggctccaagaaagt
gtcagtcaccgtgtacaagaagatgtgagtgatctaaatggttctagctaccttgagcac
ttattctttcttctaactggacgagagcttgattcagctgtggaacttgccatatctaag
ggagatgttagacttgcttgtttgttgagccaggctggtggatcaactgtaaaccgcaat
gatatcttgcagcagcttcacctttggagaaggaatgggctggattttaatttcattgag
aaggagagaattaagctttacgaattgcttgctggtaatatccatgatgcgttacaagat
tttacaattgactggaagagattcctagggttgttaatgtggcatcatctacctcccgac
agttcattacctatcatcttcagaagctatcagctcctactaaatcaggcaaaagctccg
tggcccgtcccaatatatattgatgaaggacctgcagatgggtttgtaagcgacaacaag
cattctgacatcttgtattatcttatgcttctacacagcaaagaagaggaagaatttggt
ttcctgcagactatgttcagtgccttctcttcaactgatgatccacttgactatcatatg
atctggcaccaccgaggaattctagaagcagttggagctttcacttcagatgatcttcac
actctagatatgggatttgttgcacagcttctctctcagggcctttgtcattgggctatc
tacgttgttcttcacatacccttccgtgaagatcatccatatctacacgtcactgtcatt
cgggaaatcctgtttcaatactgtgaaacttggagttctatggaatcacaacggcaattt
atcaaggacttgggtatcccttctgaatggatgcacgaagctctggcagtttattacaat
taccatggagatttcgtaaaggctcttgaccagtttattgaatgcgcaaactggcaaaga
gctcattccatttttatgacgtcagttgctcattcattgtttttgtcagctaaccattca
gaaatctggagaattgctacttcaatggatgatcgcaagtctgagattgaaaactgggat
ttgggtgctgggatttacatgtcattctatttactaaagagttcactgcaagaagatgct
gatacgatggtagaactggaaccccttgatagcacaaacgagtcttgcagaaattttgtc
ggtcgtttaaacgaatcattggctgtttggggtgacagattaccagttgaagcaagagtc
gcatactcaaagatggctgaggaaatatgcgatttacttctgtcagatctgagtaagaat
ccaagccgagagactcagctaacatgctttgagacagcctttgatgcccctttgccagaa
gatgtaagatcaacacatctgcaagacgctgtgtcactcttctctctatatctctcagag
acgggccaaatctcagcttag
DBGET
integrated database retrieval system
