Arabidopsis thaliana (thale cress): AT2G03870
Help
Entry
AT2G03870 CDS
T00041
Symbol
EMB2816
Name
(RefSeq) Small nuclear ribonucleoprotein family protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03018
RNA degradation
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT2G03870 (EMB2816)
09123 Folding, sorting and degradation
03018 RNA degradation
AT2G03870 (EMB2816)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT2G03870 (EMB2816)
03041 Spliceosome [BR:
ath03041
]
AT2G03870 (EMB2816)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AT2G03870 (EMB2816)
mRNA degradation factors
5'-3' decay
Lsm complex
AT2G03870 (EMB2816)
Spliceosome [BR:
ath03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
AT2G03870 (EMB2816)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
814913
NCBI-ProteinID:
NP_178480
TAIR:
AT2G03870
UniProt:
Q9SI54
A0A178VPR3
LinkDB
All DBs
Position
2:1179971..1181512
Genome browser
AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFVRDHDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTEEIANPFVTAEAV
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaagaaaagaaacggttttagatttggccaagtttgtagataagggtgtgcaa
gttaagctcactggtggtagacaagtgactggaactcttaaaggctatgaccaattgctt
aatcttgttcttgatgaagcagtcgagttcgttcgagatcatgatgatcctttgaagact
acggatcagacaagacgccttggtttgattgtttgccgtggaacagcggtgatgcttgtc
tcaccaaccgatggcaccgaagaaatcgctaacccgttcgttactgcagaggctgtctaa
DBGET
integrated database retrieval system
