Arabidopsis thaliana (thale cress): AT2G05120
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Entry
AT2G05120 CDS
T00041
Name
(RefSeq) Nucleoporin, Nup133/Nup155-like protein
KO
K14300
nuclear pore complex protein Nup133
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AT2G05120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT2G05120
03036 Chromosome and associated proteins [BR:
ath03036
]
AT2G05120
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AT2G05120
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AT2G05120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
815060
NCBI-ProteinID:
NP_001189511
TAIR:
AT2G05120
UniProt:
F4IGA5
LinkDB
All DBs
Position
2:complement(1841876..1846949)
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AA seq
1220 aa
AA seq
DB search
MFSPLTKRAKQSSRNEKTPRNRVPPPDSPVTPATQNRNNFISDRPATGTPAPWAPRLSVL
ARVSPGNNGDKGVDSDQLKPVFVGEFPQLLRDEQSYPGDACVSGGMDKETCLSWFITGSK
VFVWSHLTTLPSRKCVVLELPVVVLVNEESGSGLQDGKSWLVNVVSWDTSAGAATRASRS
RSPVGVVMCNRKTRAVAEKARHLIKRQSNGIRSSRAENSDLNSLITTAVAAAERLCIAIA
CSSNGELWQFTCSPTGVKSNQVQLNISSSSVSEGYPRSLIWRFSQGLARESCWEFLMLTD
CDIHCFTIEPYPDLTVSEVWQHEIVGTDGDSGIKKDIASQKQIWPLDLQVDDQGKVITVL
VATICMDRASSSSYTQYSLLTLQHKSEMRFADGREEKVLEKQGPIQVIIPKARVEDKDFL
FSMRLRVGGRPPGSAIILSGDGTATVCYCHGSSTRLYKFDLPYDAGKVLDASVLSSTDEH
EYGAWTVLTEKAGVWAIPEKAVVLGGVEPPERSLSRKNSSNERSTRDETRVTPYGVDRTA
GRENSDIQNIEDKGNPKMGFTRQTARDEESEALLGQLFEGFLLSGKVDGSLEKLSQSGAF
DRDGEANVFARKSKSIVDTLAKHWTTTRGAEIVAMTVISSQLVEKQQKHENFLHFLALSK
CHEELCSKQRHSLQIILENGEKLAAMIQLRELQNMINQNRSARFGSPQAGSEDQVSCALW
DLIQFVGERARRNTVLLMDRDNAEVFYSKVSELEEVFYCLNRQLEYIIRADQPLGTQLQR
ACELSNACVTILQTALDYKNEHQMWYPPLEGLIPWHSQTVVCNGLWCIASFMLHLLTEAS
RIDISAKSDIYTHLEVLTEVLLEACAGSTFAKLEREEENKGLLNEYWTRRDTIFDSLYRQ
AKEFMEAEIQHEGVGPQGGFSYFVFQQLYDMKQFSKLLRLGEEFQDELLIFLKRHSDLVW
LHQVFLHQFSSASDTLHTLALSQDEESMTTVEERTGPEPEDVQPTFADRKRFLNLSKIAY
VADKDADSESKVKRIEADLNLLKLQEEITKALPNGEARNRLFRPEELIETCLNIQGRWTA
IKAFEVFAWTSSSFRENHRSLLEECWRNAADQDDWDRHHQASTNEGWSEEETLQNLRNTA
LFQASKRCYGPTRVNTFDGDFAQVLPLRRENPEDSTSSVEDVLMSHKDFAEAGKLMLTAI
MLGCVEEEGIVAEEFSSPME
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgttctctccattgacgaagagagctaagcaaagctcacgcaacgaaaaaactccacgc
aatcgagtccctccgccggattctccagtaactccggcaactcaaaatcggaacaatttc
atctcagatcgtcccgccactggaactcctgctccttgggctcctcgtttatcggttcta
gctagagtttctcctggaaacaatggtgacaaaggagttgattcagatcaattaaagcct
gtattcgttggagagtttcctcaattgttgcgcgatgaacaaagttatcctggtgatgct
tgtgtatccggtggaatggataaagagacctgtctttcttggtttattactggaagtaaa
gtttttgtatggagtcatttgacgactttaccgtcgagaaaatgtgttgttcttgaactt
cctgttgttgttttggttaatgaagagtctggtagtggtttacaagatgggaaaagttgg
ttggttaatgttgtatcttgggatacttctgctggtgcagctacgagggcttctcggtct
cgtagtcctgttggtgttgttatgtgtaatagaaaaactcgagctgttgcagaaaaggct
cgtcatttaattaagcgacaaagcaatgggattagaagcagtagagctgaaaatagcgat
ctcaattctttgattactactgcagtagctgcagctgagcgtctttgtattgctattgct
tgcagttctaacggtgagctatggcaatttacctgtagccctacaggcgttaaaagtaat
caagtacagttgaacattagctcttcctctgtaagtgaggggtatccaaggtccttgatt
tggcggttttcgcaaggattggcaagagagtcgtgttgggaatttcttatgttgacagac
tgtgacatacattgttttactattgagccttatcctgatctgactgtttcagaagtctgg
caacatgagattgttggcactgatggtgattctggtatcaagaaagatatagctagtcaa
aagcagatttggcctctagatttgcaggtagatgatcagggtaaagtgattacagttctt
gttgccactatctgcatggaccgcgccagcagttctagctatacacaatattcgctttta
accctacaacataaatctgagatgagatttgcagatgggagagaggaaaaggttctggag
aaacaaggtccaatccaagtcataatcccaaaagcaagagtagaggataaagacttctta
ttctctatgagactcagagttggtggtagacccccagggtcagctataattctttcaggt
gatggaacagccacagtttgctactgtcatggaagttctacccggctctataagtttgat
ttaccttatgatgctggcaaggttttggatgcttcagttctttcctccactgatgaacat
gaatatggtgcatggactgtactaactgagaaagcaggagtgtgggcaataccagagaaa
gcagttgtgcttggtggagtcgaacctccagagagaagtctgtcacgcaaaaatagctcc
aatgagaggtctacacgagatgagacaagggtaacaccatatggtgttgatagaactgcc
ggaagggagaattctgacatacagaatattgaagacaaaggaaaccctaaaatgggtttt
actcgtcaaacagcccgtgatgaggaatcagaagctttgcttggccagctctttgagggg
tttctgttatctgggaaagttgatggatccttggagaagcttagtcagtctggtgcattt
gatagagatggagaggccaatgtttttgctcgcaaaagcaaatctatagttgacacatta
gctaagcattggacaacaactagaggggctgagatagtagctatgactgttatatcttca
caattggttgagaaacaacagaagcatgagaattttctacactttcttgctctatccaaa
tgccatgaggagctgtgttctaaacagagacattctttgcaaataattctggaaaatggt
gaaaaacttgctgccatgattcaactccgggaactgcagaatatgattaaccaaaaccgc
tcagctagatttggctcgccgcaagctggctcagaggatcaagtttcatgtgccctttgg
gatcttattcaatttgtaggggagagagcccggagaaatacagttcttttgatggacaga
gataatgctgaagttttctacagcaaggtatctgaacttgaggaagtgttttactgtctg
aacaggcaactagaatacataatcagagctgaccaaccactaggaactcaactgcagaga
gcctgcgaactctcaaatgcatgtgttacaattcttcagactgccttagattacaaaaac
gagcatcaaatgtggtatccaccacttgaaggtttaataccttggcactctcagactgtt
gtatgtaatggactgtggtgcattgcgtcctttatgcttcatctgttaactgaggcatct
aggattgatatctctgctaaatcagacatatacacgcatctcgaagtgcttactgaagtt
ttacttgaggcttgtgccggttctacctttgcaaaattggagagggaagaggagaacaaa
ggtttgcttaatgaatactggactcggcgggatactatttttgactctctttatcgacaa
gcgaaagagtttatggaagcagaaatccagcacgagggtgtgggaccacaaggagggttc
agttactttgttttccagcaactctatgatatgaaacagttctctaagcttctacggctt
ggagaagaattccaggacgagctattgatatttctaaagcgccattctgatctggtgtgg
cttcatcaggtgtttcttcatcaattctcatctgcgtctgacactcttcatacattggct
ctatcacaagatgaagagtctatgacaactgttgaagaaagaacgggaccagaacctgaa
gatgtacaaccaacattcgcagaccgcaagcggtttctgaacctttcaaagatagcctat
gtggcagataaggatgctgattccgaatcgaaagtgaagcgcattgaagctgatctcaac
ttactgaagctgcaggaagaaataacaaaagctttgccaaatggagaagctagaaaccgg
ctcttccgaccagaggagctcattgaaacctgtctcaatatccagggtcgatggacagct
ataaaggctttcgaagtatttgcatggacgagctcttcgttccgtgagaatcataggagt
cttttggaagaatgctggagaaatgctgcggatcaagacgactgggacaggcatcatcaa
gcctctactaatgaaggttggagcgaggaagaaacattacagaatctaaggaacacggcc
cttttccaggcttccaaaaggtgttacggaccaacccgagtcaacacttttgatggtgac
tttgcacaagtccttcctctgagaagagagaaccctgaggattcaacttcttctgtagag
gacgttttgatgagtcataaagatttcgctgaggcagggaaattaatgctaactgcaatc
atgcttggttgtgtagaagaagagggtattgtagcagaagagttctcatctccaatggag
taa
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