Arabidopsis thaliana (thale cress): AT2G06040
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Entry
AT2G06040 CDS
T00041
Name
(RefSeq) F-box/LRR protein
KO
K15082
DNA repair protein RAD7
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT2G06040
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
AT2G06040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_RPS2
LRR_NXF1-5
MRC1
Motif
Other DBs
NCBI-GeneID:
815159
NCBI-ProteinID:
NP_178661
TAIR:
AT2G06040
UniProt:
F4IIC2
LinkDB
All DBs
Position
2:complement(2352145..2355597)
Genome browser
AA seq
762 aa
AA seq
DB search
MTILRSREIPSVSPKPLPKESDTEPSTPARTLEPELHRSPDETAPELGLVDEPTHTTRRR
SLRLAHQFDGDDCVTEKEVSVDEKFLSLRSGKRVAKRGVDYGIEIESSKFDFDLKLGESA
SKTKRVCVDLVEETIVKNESEDSVDLEDKSSSGVLGDSLAEKWYVVEVENESNNKGKGIM
EDSYGESDVICGQSYEKQSSSMGRRRYTREEKGKGIMQVEDVSSPVTVEIVEVDEEEMEI
ESLVNSEKPPDVSVTELAATMANVEQAQNRENSNEIGNDSRTQHFRDIAERIAHRFAHFD
AQVEEEEDLSDKEGEQQVEDWPGPFSTAMKIIKDREEYTTPHVGIGVSNKERSSPTIWVP
RSNFSFPPRKAPSLQELSLRVLVKNADAITSLDYVPDTLRVKLCQLLCDSRRMDLHFLDL
LVQGSPTEICVPDCSWLTEEEFTECFKNCDTSNLMVLQLDQCGRCMPDYILPFTLARSPK
VLPMLSTLSISGACRLSDVGLRQLVSSAPAITSINLNQCSLLTSSSIDMLSDSLGSVLRE
LYINECQNIDMKHILAALKKFEKLEVLSLADLPSVKGRFLKEFVTARGQTLKQLILTNSR
KLSDSSIKVISENCPNLSVLDLANVCKLTDSSLGYLANGCQALEKLIFCRNPFSDEAVAA
FVETAGGSLKELSLNNVKKVGHNTALALAKHSDKLQILDISWCREMSNDLLGYIVDNSSS
LKVLKVFGCSQVTDVFVKGHSNPNVKILGVKMDPFLGHLSDN
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgacgattcttcgatctcgcgaaatcccatctgtctcacccaagccactccctaaagaa
tccgacactgagccgtcgactcccgctcgtacactagagcccgaacttcaccgctcgccg
gatgagaccgctcctgaattgggtcttgttgatgaacccactcacactacccggagacgt
agtcttcgtcttgcacaccaatttgacggcgatgattgtgtcactgagaaagaggttagt
gtggatgaaaagtttttgagtttgcgttcagggaagagagttgctaagagaggtgtcgat
tatggaattgaaattgagtctagcaagtttgatttcgatttaaagttaggagaaagtgcg
agtaaaacaaagagggtttgtgtggatttggttgaagaaactattgtgaagaatgaatca
gaggatagtgtggatttggaagataagagtagtagtggtgtgttaggtgactcgttagcg
gagaagtggtatgtagtagaagtagagaatgagagcaataacaaaggaaaggggataatg
gaagattcctatggagaaagtgatgtgatttgtggtcagagttatgagaagcagagtagt
tctatgggtagaagaagatatactagggaggagaagggaaagggtattatgcaggtggag
gatgtttcttctccggtaacggttgagattgtcgaagttgatgaagaagaaatggaaatc
gagagcttggttaacagtgagaagcccccggatgtctctgtaacagaattggctgcgacg
atggctaatgttgagcaagcgcagaatcgagaaaatagtaatgagattggaaacgattca
agaactcagcactttcgtgacattgcagagaggattgctcacagatttgctcattttgat
gctcaagtggaggaagaagaggatttgtcagataaagagggggagcagcaggtcgaagat
tggccgggtcctttctctactgctatgaaaataattaaggaccgagaagagtacacgact
ccgcatgttggtattggcgtctccaacaaagaaagatcttcaccaactatttgggttccc
agaagtaactttagtttcccccctcggaaggctccatctctgcaagaattatccttgcga
gttcttgtcaagaatgctgatgccatcacttctcttgactatgttccagacacattgagg
gtcaaactttgtcaattgctttgtgattctaggagaatggacctacactttcttgatctt
cttgtccagggatctccaacagaaatttgtgttccagattgctcatggctgaccgaggaa
gagttcactgaatgttttaagaactgtgacaccagcaacttgatggttcttcaacttgac
cagtgtgggcggtgtatgccagattatatattacccttcactttagcaaggtcaccaaaa
gtgttgccgatgctatctactttatctataagtggtgcatgccggctttccgatgtgggg
ctacgacaactggtttcctctgctcctgcgattacgtctattaatctcaaccaatgctct
cttctaacatcatctagcattgatatgttatctgattcattggggtcagttttaagggaa
ctgtatatcaacgagtgccaaaacattgatatgaagcatattctcgcagcattgaaaaag
tttgagaagttggaagtattgtcccttgcggatcttccttctgtcaagggtcggttcttg
aaggagtttgttactgctagaggtcagaccctgaagcagctgattttgaccaactctcgg
aagttatctgattcttctattaaagtcatctctgaaaactgtcccaatttaagcgtcctt
gacctggctaacgtatgcaagctgacagattcttctctgggttaccttgcaaatggctgt
caagcgttggagaaattgattttttgtcgcaaccctttcagtgatgaagctgtagctgca
tttgtagaaaccgcaggtggttctctgaaggagctatcactaaacaatgttaagaaggtt
ggccacaacacggccctagcacttgccaaacattcagataaactgcagattttggatata
tcctggtgccgagaaatgtccaacgatttattaggctacattgtcgataacagttcatct
ctgaaagtgttgaaggtctttggatgcagtcaggtgacggatgtatttgttaaaggtcac
tcaaatcctaatgtcaagatcttaggtgtgaagatggatcctttcttaggccacctttct
gataactga
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