Arabidopsis thaliana (thale cress): AT2G06990
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Entry
AT2G06990 CDS
T00041
Symbol
HEN2
Name
(RefSeq) RNA helicase, ATP-dependent, SK12/DOB1 protein
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT2G06990 (HEN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT2G06990 (HEN2)
03041 Spliceosome [BR:
ath03041
]
AT2G06990 (HEN2)
03009 Ribosome biogenesis [BR:
ath03009
]
AT2G06990 (HEN2)
03016 Transfer RNA biogenesis [BR:
ath03016
]
AT2G06990 (HEN2)
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AT2G06990 (HEN2)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
AT2G06990 (HEN2)
Spliceosome [BR:
ath03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
AT2G06990 (HEN2)
Complex C
U4/U6.U5 tri-SnRNP related factors
AT2G06990 (HEN2)
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
Pre-60S particles
Helicases
AT2G06990 (HEN2)
Transfer RNA biogenesis [BR:
ath03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
AT2G06990 (HEN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
ResIII
GIT1_C
ATPase_2
nSTAND3
Motif
Other DBs
NCBI-GeneID:
815269
NCBI-ProteinID:
NP_565338
TAIR:
AT2G06990
UniProt:
Q9ZVW2
A0A178VT15
LinkDB
All DBs
Position
2:2894904..2902020
Genome browser
AA seq
995 aa
AA seq
DB search
MSAQMEEPETLGKRKESESSKLRSDETPTPEPRTKRRSLKRACVHEVAVPNDYTPTKEET
IHGTLDNPVFNGDMAKTYPFKLDPFQSVSVACLERKESILVSAHTSAGKTAVAEYAIAMA
FRDKQRVIYTSPLKALSNQKYRELQHEFKDVGLMTGDVTLSPNASCLVMTTEILRAMLYR
GSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICY
LHKQPCHVVYTDFRPTPLQHYAFPMGGGGLYLVVDDNEQFREDSFVKMQDTFPKPKSNDG
KKSANGKSGGRGAKGGGGPGDSDVYKIVKMIMERKFEPVIIFSFSRRECEQHALSMSKLD
FNTDEEKEVVEQVFNNAMQCLNEEDRSLPAIELMLPLLQRGIAVHHSGLLPVIKELVELL
FQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD
ERGICIIMIDEQMEMNTLRDMMLGKPAPLLSTFRLSYYTILNLLSRAEGQFTAEHVIRHS
FHQFQHEKALPDIGNKVSKLEEEAAILNASGEAEVAEYHNLQFDIAKHEKKLMSEIIRPE
RVLCFLDTGRLVKIREGGTDWGWGVVVNVVKNSSVGTGSASSHGGGYIVDTLLHCSTGFS
ENGAKPKPCPPRAGEKGEMHVVPVQLPLISALSRLRISVPSDLRPVEARQSILLALQELS
SRFPLGFPKLHPVKDMNIQDTEIVDLVSQIEEVEQKLLAHPMHKSEDDQQIKSFQRKAEV
NYEIQQLKSKMRDSQLQKFRDELKNRSRVLKKLGHIDADGVVQVKGRAACLIDTGDELLV
TELMFNGTFNDLDHHQVAALASCFIPVDKSNEQVNLRNELTKPLQQLQDSARKIAEIQHE
CKLEIDVEEYVESTIRPFLMDVIYSWSKGASFAEIIQMTDIFEGSIIRSARRLDEFLNQL
RAAAEAVGESSLESKFAAASESLRRGIMFANSLYL
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcccaaatggaagaaccagagactctcggcaaaagaaaagaatctgaaagttca
aaacttcgttctgatgaaactccgacgccagaaccaagaacgaagcgtagaagtcttaaa
cgtgcttgtgtacatgaagttgctgttcctaatgattacacaccaacgaaagaagagacg
attcatgggacgcttgataatcctgtcttcaatggagacatggccaagacttatcctttt
aagcttgacccttttcaaagtgtatctgtagcttgtttagagagaaaagaatcgattttg
gtatctgctcatacttcagctggtaaaactgctgttgctgagtatgctattgcaatggcg
tttagagataagcagagagttatttacacttctcctttgaaagctttgagtaatcagaag
tatagagagttgcaacatgagtttaaagatgttggtttgatgactggtgatgttactctt
tcacctaatgctagttgtttggttatgactactgagatcttgagagctatgctttataga
ggatctgaagtgttaaaggaggtcgcttgggttatttttgatgagattcattatatgaag
gatagagaaagaggagttgtttgggaagagagtattattttcctgcctcctgctattaag
atggtattcctttctgcgactatgtcgaatgctactgaatttgcggaatggatatgttat
ttgcacaagcagccatgtcatgttgtgtacacagattttaggccaacacctctgcagcat
tatgcttttcctatgggtgggggtggactgtaccttgtggttgatgataatgagcagttt
cgggaggatagtttcgttaagatgcaggatactttccccaaaccgaaatctaatgatggg
aaaaagagtgcgaatggcaaatctggtggtaggggtgctaaaggtggaggtggccctggt
gattctgatgtttacaaaattgtaaagatgatcatggagagaaaatttgaaccagtcatt
atcttcagcttcagtagaagagagtgtgaacagcatgcattgtcaatgtcaaaactcgat
tttaatacagatgaagagaaagaagttgtggaacaggtgtttaataatgcaatgcagtgc
ttgaatgaagaggatagatccttacctgccattgaactgatgttgccactgctccaacgt
ggtattgctgtccatcattctggtcttcttcctgtcatcaaggaattagtggagcttctt
tttcaggaaggacttgtgaaagcgctttttgccacagaaacctttgctatgggtttgaat
atgcccgccaaaactgtagtgtttactgctgttaagaagtgggatggtgacagccatcgt
tacattgggtctggtgaatatatccagatgagcggcagggctggacgtcgtggaaaggac
gagcgtggcatctgcattattatgattgatgaacagatggagatgaatacactcagggac
atgatgttgggaaaaccagcccctttgcttagtacttttaggctgagttactacacaatt
ttgaatctattgagtcgtgccgaaggacaatttactgctgagcatgttataaggcactcg
ttccatcaattccagcatgaaaaggctttaccggatattgggaataaggtgtccaaactt
gaagaggaagctgccattcttaacgcttctggagaggcggaggttgctgaataccataat
ctacaatttgacattgctaaacatgaaaagaaacttatgtcagaaataattaggcctgaa
agggtgctttgttttcttgatactggtcggctggttaaaataagagaaggtggaacggat
tggggctggggagttgtcgttaatgttgtaaaaaattcttcagttggaactggttccgcc
tcttcacatggtggcggatatatagtggatactctacttcattgctctactggttttagt
gaaaatggcgcaaagccaaagccatgtcctccccgtgctggggaaaagggtgaaatgcat
gtggttcctgttcagctacccttaatttctgctttgagcagactaaggatatcagttcct
tctgatcttcggccagtggaagcaagacagagtatactacttgcattacaggagttgtca
agtcgcttccctctagggttcccaaaactccatccagtcaaggatatgaatattcaagac
acagagatagtggatctggtcagccaaatcgaagaagttgagcagaagttacttgctcat
ccgatgcacaagtctgaagatgatcaacaaatcaagagtttccagaggaaagcggaggtg
aattatgaaattcaacagctaaaatcgaaaatgcgtgattcccagctccaaaagtttcga
gatgagcttaagaaccgatctcgggtattaaagaaacttggacacattgatgctgatggt
gtcgtccaggtaaagggacgagctgcgtgcttgatagacacaggggatgaattgcttgtc
actgaactgatgtttaatggtacttttaatgatctggatcatcaccaagtagcagccctt
gcaagctgtttcattcctgttgataaatcaaacgaacaggtaaatttaaggaatgaactt
accaaaccattgcagcagctccaagatagtgcacggaaaatagcagagatacaacatgaa
tgcaaactggaaattgacgtggaagagtatgtggaatccaccatcaggcctttcctgatg
gatgttatctactcttggtcaaagggcgcaagctttgcagagattatacaaatgactgac
atattcgaaggtagtatcatcagaagtgctagaagactcgacgagtttttgaaccagctt
cgagctgcagcagaggcagttggtgaaagcagtttagagagcaagtttgcagctgctagc
gagagcttgcgacgaggtattatgtttgcaaattcgctttacttgtaa
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integrated database retrieval system
