Arabidopsis thaliana (thale cress): AT2G13370
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Entry
AT2G13370 CDS
T00041
Symbol
CHR5
Name
(RefSeq) chromatin remodeling 5
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT2G13370 (CHR5)
03036 Chromosome and associated proteins [BR:
ath03036
]
AT2G13370 (CHR5)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
AT2G13370 (CHR5)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
AT2G13370 (CHR5)
SLIK complex
AT2G13370 (CHR5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
815823
NCBI-ProteinID:
NP_001325087
TAIR:
AT2G13370
UniProt:
F4IV99
LinkDB
All DBs
Position
2:complement(5544054..5556560)
Genome browser
AA seq
1724 aa
AA seq
DB search
MAFFRNYSNDTVSHNVLDENEERQNAATFQSSPLNEDVDGTYSERGFDMNMDVQYQSDPE
PGCSIRQPNETAVDNVADPVDSHYQSSTKRLGVTGRWGSTFWKDCQPMGQREGSDPAKDS
QSGYKEAYHSEDNHSNDRSEKLDSENENDNENEEEDNEMNKHQSGQADVPADEMLSDEYY
EQDEDNQSDHVHYKGYSNPTNSRSLPKAGSAVHSNSRTSRAIHKNIHYSDSNHDHNGDAD
MDYEEEEDEDDPEDADFEPYDAADDGGASKKHGQGWDVSDEDPESDEEIDLSDYEDDYGT
KKPKVRQQSKGFRKSSAGLERKSFHVSSRQKRKTSYQDDDSEEDSENDNDEGFRSLARRG
TTLRQNNGRSTNTIGQSSEVRSSTRSVRKVSYVESEDSEDIDDGKNRKNQKDDIEEEDAD
VIEKVLWHQLKGMGEDVQTNNKSTVPVLVSQLFDTEPDWNEMEFLIKWKGQSHLHCQWKT
LSDLQNLSGFKKVLNYTKKVTEEIRYRTALSREEIEVNDVSKEMDLDIIKQNSQVERIIA
DRISKDGLGDVVPEYLVKWQGLSYAEATWEKDVDIAFAQVAIDEYKAREVSIAVQGKMVE
QQRTKGKASLRKLDEQPEWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQS
VSMLGFLQNTQQIPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEF
YNEKKVGRPIKFNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFS
TKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEFVENYKNLSSFNESELANLHLELR
PHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNI
VVELKKCCNHPFLFESADHGYGGDINDNSKLDKIILSSGKLVILDKLLVRLRETKHRVLI
FSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGL
GINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRK
MVLDHLVIQKLNAEGRLEKRETKKGSNFDKNELSAILRFGAEELFKEDKNDEESKKRLLS
MDIDEILERAEQVEEKHTDETEHELLGAFKVANFCNAEDDGSFWSRWIKPDSVVTAEEAL
APRAARNTKSYVDPSHPDRTSKRKKKGSEPPEHTERSQKRRKTEYFVPSTPLLEGTSAQV
RGWSYGNLPKRDAQRFYRTVMKFGNHNQMACIAEEVGGVVEAAPEEAQVELFDALIDGCK
ESVETGNFEPKGPVLDFFGVPVKANELLKRVQGLQLLSKRISRYNDPISQFRVLSYLKPS
NWSKGCGWNQIDDARLLLGILYHGFGNWEKIRLDESLGLTKKIAPVELQHHETFLPRAPN
LKERATALLEMELAAAGGKNTNAKASRKNSKKVKDNLINQFKAPARDRRGKSGPANVSLL
STKDGPRKTQKAEPLVKEEGEMSDDGEVYEQFKEQKWMEWCEDVLADEIKTLGRLQRLQT
TSADLPKEKVLFKIRRYLEILGRRIDAIVLEHEEDLYKQDRMTMRLWNYVSTFSNLSGDR
LNQIYSKLKQEKEEEEGVGPSHLNGSRNFQRQQKFKTAGNSQGSQQVHKGIDTAKFEAWK
RRRRTENDVQTERPTITNSNSLGILGPGPLDRSHRARQTGFPPR
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atggctttctttaggaactactcaaacgatactgtgtcacataatgttcttgatgaaaat
gaggagcggcaaaatgctgctacttttcagagttcacctttgaatgaagatgtggatggt
acttatagtgaaagaggctttgacatgaacatggacgtacagtatcaaagtgacccagaa
ccaggatgtagtattaggcagccaaatgagacagcagttgataatgtagctgatcctgtg
gattcccattatcaatcttcgacaaagagattgggtgtaactggtagatggggttccaca
ttttggaaagattgtcagccaatgggacaaagagagggttctgatcctgccaaagattca
caatccggttacaaagaagcatatcatagtgaagataatcactcaaatgaccggagtgaa
aagttagattctgaaaatgaaaatgataatgaaaatgaggaggaggataatgaaatgaac
aagcatcaaagtggtcaagctgatgtcccagcagatgaaatgttgtctgatgaatattat
gaacaagatgaagataatcaaagcgaccatgtgcactacaaagggtatagtaatcctaca
aattctagatcactgccaaaggcaggatctgctgtccatagcaactcaaggacttcaaga
gcaattcacaaaaacattcactatagtgatagtaatcatgaccacaatggggatgctgat
atggactatgaagaggaggaagatgaggatgaccctgaagatgctgactttgagccctat
gatgctgctgatgatggtggtgcaagtaaaaagcatggccaaggttgggacgtttctgat
gaagaccctgagagtgatgaagaaattgatctttccgattacgaggacgactacggaaca
aaaaagcccaaggttaggcaacaaagtaaaggtttccggaaatcaagcgctggactcgaa
cgaaaatcattccatgtttctagtcgacaaaagaggaaaacatcatatcaagatgacgac
tcagaggaagactctgaaaatgacaatgatgagggttttagaagcctggccagaagaggc
acaactctccgacaaaacaatggaaggtccaccaataccataggacagagtagtgaagtt
cgcagctccacccgatcagttcgtaaagtctcttatgtagagagtgaagacagtgaagat
atagatgatgggaaaaatcgtaaaaaccaaaaggatgacattgaagaggaggatgctgat
gttattgaaaaagtgctctggcatcagctgaagggtatgggtgaagatgttcagacaaat
aacaaatcaacagttcctgttctagtaagccaactgtttgatactgagccagattggaat
gaaatggaattccttataaaatggaaaggccaatcacacttgcattgtcagtggaaaacg
ttgagtgatctccaaaatcttagtggattcaagaaggttcttaactatacaaagaaagtg
acggaggagattaggtacaggacagcactctcgcgagaggagattgaggtcaacgatgtg
agcaaagaaatggatctggacatcattaagcagaatagtcaggtagaaagaataattgca
gatcgaataagcaaagatggtttaggtgatgttgtaccagagtatctagtaaagtggcaa
gggctatcttatgctgaagcaacttgggagaaggatgtcgatatagcatttgcacaagtt
gctattgatgagtacaaggctcgtgaagtttcaattgcagtgcaagggaaaatggtggaa
cagcagcgtacaaaaggaaaagcgagcttgaggaagcttgacgagcagcctgagtggcta
attggaggtacactacgtgactatcagctggagggtttgaattttcttgtcaacagctgg
cttaatgatactaatgtcattttggctgatgaaatgggtcttggtaaaactgttcagtca
gtttcaatgcttgggtttttgcagaatacccaacaaattcctggtccttttcttgttgtt
gtgcctttgtcaacactagctaattgggctaaagaatttagaaagtggcttcccggcatg
aatataatagtatatgttggcacccgggctagtcgagaggtatgtcagcaatacgaattt
tacaatgaaaagaaagtaggccggcccataaaattcaatgcacttttgactacttatgaa
gtagtcttgaaggataaagctgtcctctccaagattaagtggatttacttaatggtggat
gaagcacatcgactgaaaaatagtgaggcacagctctacacagctcttttggaatttagc
acgaagaacaaattgcttattactggtactccactacagaatagtgtcgaagagctttgg
gctctgctccactttcttgatcctggcaagtttaagaataaggatgagttcgttgaaaac
tacaagaaccttagctcattcaatgaatctgagctcgccaacctgcatttagaattgaga
ccccatattctacgacgagtgattaaagatgttgaaaagtcgttgcctccaaaaatcgag
cgtatactaagagttgagatgtcccctcttcagaaacagtactacaaatggatactggag
cgcaacttccatgatttaaataaaggggtgcggggtaatcaggtttcacttttaaacatc
gtggtggagttgaagaaatgctgcaatcatcctttcttatttgaaagtgcagaccatgga
tatgggggtgacataaacgataactctaagctggataaaattattctaagtagcggaaag
ctagttattctagacaagctactggttagactgcgtgagactaagcatcgtgtgcttatc
ttttctcagatggtaagaatgttagatatcctggcagaatacctgtctcttagaggtttc
cagttccagagactggatggtagtactaaggcagaactgcgtcagcaagcaatggatcat
tttaacgcacctgctagtgacgacttttgctttcttctttcgacccgagctggtggactg
ggtatcaatctggctactgctgatacagtcgttatatttgactctgattggaatccacaa
aatgacctgcaggccatgagtcgagcgcatagaattgggcaacaagaggtcgtgaacatt
tatagatttgtcactagcaaaagtgttgaagaagaaatcctggagcgcgccaaaagaaaa
atggttcttgatcatttggttattcaaaaactgaatgcggagggtaggctggagaagcga
gaaactaaaaaaggaagtaattttgacaagaatgagctttctgcaatattgagatttgga
gcggaagaactttttaaagaggataaaaatgatgaagaaagcaaaaagcggctgttgagt
atggatattgatgaaatcttagagagggcagagcaagttgaggaaaagcatactgatgaa
acagaacacgaactgttgggtgcttttaaggttgccaacttttgcaacgctgaagatgat
gggtccttctggagtcgctggataaaacctgattctgtggttacggccgaagaagctctt
gcaccacgggctgctaggaatacaaagagttatgtggatcctagccatcctgacaggact
agcaaaagaaaaaagaaaggatctgagcctccggagcatacagagagaagtcaaaagcgc
agaaaaacggaatattttgttccttcaactccactattagaggggacttcagctcaagtt
agaggctggtcttatggaaatcttcctaagagagatgcgcaacgattttatcgaactgtc
atgaagtttgggaaccataatcaaatggcatgtattgcagaagaggtgggtggtgttgtt
gaagcagccccggaggaagcacaagttgagctatttgatgctttaattgatggttgtaag
gaatctgttgaaacaggaaattttgaaccaaagggtcctgtgttggatttctttggtgtg
ccagttaaagcaaacgaactattaaaacgtgtgcaaggactgcagctcctatcaaagcgt
attagtcgatataacgatccaatttcacaattccgggtgttgtcataccttaaaccttca
aattggtccaagggttgcggttggaatcagatcgatgatgcgagattgcttctgggaatt
ctttatcatggttttgggaattgggaaaagatacgattagatgagagccttggacttaca
aagaagattgctccggttgaacttcaacaccatgagacttttctacctcgtgctccaaac
ttaaaggagcgtgccactgcacttctggaaatggaacttgctgcagcaggagggaaaaat
acaaatgccaaagcatcccgtaaaaattccaaaaaggtcaaggataatcttattaatcaa
tttaaagctcctgccagagaccggagaggaaaatctggtcctgccaatgtaagtttatta
tcaacaaaagatggacctcgaaaaacccaaaaagctgagccgttggtgaaggaagaaggg
gaaatgtctgatgatggggaagtttacgagcagttcaaggagcagaaatggatggaatgg
tgtgaagatgtcttggccgatgaaatcaaaactcttggacgtctacaaagactgcaaacc
acaagtgccgatctgccaaaggagaaggtacttttcaaaatccggagatatttggaaatc
cttgggcgaagaatagatgcaattgtcttagaacatgaagaagatctatacaagcaagat
agaatgacaatgagattgtggaactatgtttcaactttctcaaatttgtcgggggatcga
ctcaatcaaatctactccaaattgaagcaggagaaagaggaagaggaaggggtcgggcca
tcgcacctcaatggttctaggaacttccagaggcaacaaaaattcaaaacagcagggaac
tcccaaggatcacagcaggttcacaagggcattgacacagcaaagtttgaagcgtggaaa
cgaagaagaagaacagaaaacgatgttcagactgagcgaccaacgataacaaactctaac
tcgctgggaatactcggccctggaccattggatagaagccatagggcacgtcaaaccgga
tttcccccaagataa
DBGET
integrated database retrieval system