Arabidopsis thaliana (thale cress): AT2G16780
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Entry
AT2G16780 CDS
T00041
Symbol
MSI2
Name
(RefSeq) Transducin family protein / WD-40 repeat family protein
KO
K10752
histone-binding protein RBBP4
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03082
ATP-dependent chromatin remodeling
ath03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
AT2G16780 (MSI2)
03083 Polycomb repressive complex
AT2G16780 (MSI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ath03036
]
AT2G16780 (MSI2)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
AT2G16780 (MSI2)
Histone modification proteins
HAT complexes
HATB complex
AT2G16780 (MSI2)
HDAC complexes
Sin3A-HDAC complex
AT2G16780 (MSI2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
AT2G16780 (MSI2)
PRC2.2
AT2G16780 (MSI2)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
AT2G16780 (MSI2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
AT2G16780 (MSI2)
Chromatin remodeling factors
NuRD complex
AT2G16780 (MSI2)
NuRF complex
AT2G16780 (MSI2)
NuRF complex (fruit fly)
AT2G16780 (MSI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
MIOS_WD40
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Beta-prop_DCAF4
Cytochrom_D1
Beta-prop_Vps41
DUF6922
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
816179
NCBI-ProteinID:
NP_179269
TAIR:
AT2G16780
UniProt:
O22468
A0A7G2EB44
LinkDB
All DBs
Position
2:complement(7281374..7283686)
Genome browser
AA seq
415 aa
AA seq
DB search
MADEGKEETGMGQVEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYF
GVHKLILGTHTSGSAQDFLMVADVVTPTPNAEPGIGGANQDPFIPKVEIRQRIRVDGEVN
RARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTSECDPDLRLVGHDKEGYGLSWSPFK
EGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDG
RLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVM
SSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHG
GHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAESIYRDEEDAEDIKEDITQQS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgaaggtaaggaggagacaggaatgggtcaggtcgaggaagatttttctgtg
tggaagaagaacacaccatttctctacgatcttttgatctctcacccactcgaatggcca
tctctcaccgtccattgggttccatcgacgccaaatccttacgtagcagactcttacttc
ggtgtccacaagcttatactcggtactcatacttccggtagtgctcaagattttctcatg
gtcgccgacgtcgttaccccgacaccaaacgcagaacctgggataggcggcgctaatcag
gatccctttattcctaaggtggagattaggcagaggatacgtgttgatggagaagtgaac
agagcgcggtgtatgcctcaaaagccgacgcttgtgggtgcaaagacgagtgggtgtgag
gtgtttctgtttgattacgccaaacatgctgcaaagtctcaaacgagtgagtgtgatcct
gatctgaggctagtgggacatgacaaggaagggtatggattgtcttggagtcctttcaag
gaaggttatcttttgagtggttcacaggatcagaagatctgtctttgggatgtttcagct
acaccgcaagataaggttttgaatgcaatgtttgtgtatgagggacatgaaagtgctatc
gcagatgtgtcatggcacatgaagaatgagaacctttttggttctgcgggtgaggatggc
cgattggtgatatgggacacacggacaaaccaaatgcaacaccaagtgaaagttcacgag
agagaggtcaactatctatctttcaatccgttcaacgaatgggtattggccacagcttcc
tcagactccactgttgctttgtttgacctccggaaacttaatgcgccattgcatgtcatg
agcagccatgagggagaggtcttccaagtggagtgggatcctaaccatgaaacagtactc
gcatcttcaggggaggacagaaggctgatggtctgggacctgaacagggttggagaagag
cagcttgagatagagttggatgcagaagatggtccaccagagttactcttctctcacgga
ggccacaaggctaagatatcagactttgcttggaacaaaaacgagccttgggtcattgca
agtgtagctgaagacaacagtcttcaggtgtggcagatggcagaaagcatctatcgcgat
gaagaggatgccgaggacatcaaagaagatattacacaacaatcatga
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