Arabidopsis thaliana (thale cress): AT2G17790
Help
Entry
AT2G17790 CDS
T00041
Symbol
VPS35A
Name
(RefSeq) vacuolar protein sorting-associated 35A-like protein
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
AT2G17790 (VPS35A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT2G17790 (VPS35A)
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
AT2G17790 (VPS35A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
SOP4
Motif
Other DBs
NCBI-GeneID:
816289
NCBI-ProteinID:
NP_179370
TAIR:
AT2G17790
UniProt:
Q7X659
LinkDB
All DBs
Position
2:7733563..7739675
Genome browser
AA seq
787 aa
AA seq
DB search
MIADGSEDEEKWLAAGAAAFKQNAFYMQRAIDSNNLKDALKYSAQMLSELRTSKLSPHKY
YDLYMRAFDELRKLEIFFMEETRRGCSVIELYELVQHAGNILPRLYLLCTAGSVYIKTKE
APAKEILKDLVEMCRGIQHPLRGLFLRSYLAQISRDKLPDIGSEYEGDADTVIDAVEFVL
LNFTEMNKLWVRMQHQGPAREKERREKERGELRDLVGKNLHVLSQLEGVDLDMYRDTVLP
RVLEQIVNCRDEIAQYYLIDCIIQVFPDEYHLQTLDVLLGACPQLQASVDIMTVLSRLME
RLSNYAALNAEVLPYFLQVEAFSKLNNAIGKVIEAQEDMPILSAVTLYSSLLKFTLHVHP
DRLDYADQVLGSCVKQLSGKGKIDDTRATKELVSLLSAPLEKYNDVVTALKLTNYPLVVE
YLDTETKRIMATVIVRSIMKNNTLITTAEKVEALFELIKGIINDLDEPQGLEVDEDDFQE
EQNSVALLIHMLYNDDPEEMFKIVNVLKKHFLTGGPKRLKFTIPPLVVSTLKLIRRLPVE
GDNPFGKEASVTATKIFQFLNQIIEALPNVPSPDLAFRLYLQCAEAADKCDEEPIAYEFF
TQAYILYEEEISDSKAQVTALQLIIGTLQRMQVFGVENRDTLTHKATGYAAKLLKKPDQC
RAVYACSHLFWLEDRETIQDGERVLLCLKRALKIANSAQQVANTARGSTGSVTLFIEILN
KYLYFYEKGVPQITVESVESLIKLIKNEESMPSDPSAESFFATTLEFMEFQKQKEGAIGE
RYQAIKV
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcagacggatcagaagatgaagagaaatggctcgccgccggtgctgctgctttc
aagcaaaacgcattttacatgcaacgcgctattgactcgaataatctgaaagatgctctc
aagtattcggctcagatgctaagcgagttacggacttcgaagctatcacctcacaagtac
tatgatctatatatgagagcttttgatgaattgaggaaacttgagattttctttatggaa
gaaactcgtcgtggctgctcagtcattgaactctatgagctggttcagcatgctggtaac
atattaccgcgtttgtatctcctatgtacagcaggatccgtgtatatcaaaaccaaggaa
gctcctgccaaggaaattcttaaagatcttgttgagatgtgccgtgggattcagcatcct
ctacgtggtctcttcttaagaagttaccttgcgcagattagtcgagataaattacctgac
attggttctgagtatgaaggagatgctgatacagtcatagatgctgtggagtttgtacta
ctgaactttactgagatgaataaactctgggtcagaatgcaacatcagggacctgctcga
gaaaaggagagacgggagaaagagaggggcgagcttcgtgaccttgttggaaagaacctt
cacgtgctgagtcagttagaaggtgtggaccttgatatgtacagagatacagttcttcct
agagtcttagagcagattgtgaactgcagagatgagattgcccaatattacctaatagac
tgtataattcaagtttttcctgacgagtatcacttgcagactctagatgtacttcttggg
gcgtgtcctcaacttcaggcatcagttgacatcatgacagtgctttcccgtttaatggag
aggctgtcaaattatgctgccttaaatgcggaagtattaccttatttcctgcaagtggaa
gctttctcaaagttgaataatgcaattggaaaggtgatagaagcacaagaagacatgcct
attctgagtgcagtaaccctatattcctcccttctcaagtttactcttcacgttcaccct
gatcggcttgattatgcggaccaagtgttgggatcatgtgttaagcaactgtccggaaaa
ggaaagattgatgacactcgtgcaacaaaggagcttgtctcgcttttaagtgctccctta
gagaagtataatgatgttgtcaccgcccttaaactaactaactatcccctcgtggtggag
taccttgataccgaaacaaagagaataatggctactgttatagttcgaagcattatgaaa
aacaatactcttattactacagcggagaaggttgaagcattgtttgaactgattaaagga
attatcaacgatttggatgagccgcaaggtcttgaggttgatgaagatgattttcaggag
gagcagaattctgttgcgcttctcattcatatgttatataatgatgacccagaagagatg
tttaagatagtcaatgtcctgaagaagcatttcctgacaggagggccaaagcgcttaaaa
ttcaccattcctccccttgttgtttctactctaaagctaatcaggcgattgccagtggaa
ggagacaatccttttggaaaagaggcttccgttactgctactaaaatattccaatttcta
aatcagattatcgaagcgctacctaatgttccatcacctgacctggcattccggttgtac
ttgcaatgtgctgaggctgcggataagtgtgatgaagaaccaattgcatacgaatttttc
acccaggcatacatcttatacgaagaagaaatttcggactcaaaggcccaggtgactgcg
ttacaacttataattggaactctgcagaggatgcaagtatttggtgttgagaatagagat
acattaacgcacaaggctacggggtatgcagcgaaacttctaaagaaacctgatcaatgt
cgagctgtttatgcctgttctcatttgttctggctggaagatcgtgagaccatacaagat
ggagaaagggttctactttgtctgaaacgagcgcttaaaattgcaaattcggctcaacaa
gtggccaacacagctcggggtagtacagggtctgttaccctcttcatcgagatactaaac
aagtacctctatttctatgagaaaggggttccacagataacagttgaatcagtagaaagc
ctgataaaactgatcaagaacgaagaatcgatgccctctgatccatctgctgaatcattc
tttgcaactacgcttgagttcatggagttccaaaagcagaaagagggtgccattggtgag
agataccaggcgatcaaagtatag
DBGET
integrated database retrieval system
