Arabidopsis thaliana (thale cress): AT2G18760
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Entry
AT2G18760 CDS
T00041
Symbol
CHR8
Name
(RefSeq) chromatin remodeling 8
KO
K10841
DNA excision repair protein ERCC-6
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AT2G18760 (CHR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ath03036
]
AT2G18760 (CHR8)
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT2G18760 (CHR8)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
AT2G18760 (CHR8)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
AT2G18760 (CHR8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
816391
NCBI-ProteinID:
NP_001318246
TAIR:
AT2G18760
UniProt:
Q9ZV43
A0A178VUI7
LinkDB
All DBs
Position
2:8128706..8134401
Genome browser
AA seq
1187 aa
AA seq
DB search
MEEDEDQFLLSSLGVTSANPEDLEQKILDEATKKPDNDEGGSVEEKSTQLEGTNLLSSSQ
NELLNKLRAVKFEIDAVASTVENVDEIAAEKGLKKDDESDLQGLHSGSALQHALATDRLR
SLKKRKIQLEKELTGLHGQSASSSADHGNLLRDLVKEKPSLKRKLKEIRKPSRRDGKKVK
VVSFREDTDFDAVFDGASAGFVETERDELVRKGILTPFHKLDGFERRLQQPGPSNSRNLP
EGDDENEDSSIIDRAVQSMSLAAKARPTTKLLDAEDLPKLEPPTAPFRRLRKLYKTPNSP
DNEAKKRKAGKKSKKTRPLPEKKWRKRISREDSSLQGSGDGRRILTTSSCEEEELDDFDD
ADDNERSSVQLEGGLNIPECIFRKLFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQV
LSFLGSLHFSKMYKPSIIICPVTLLRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQGKA
SESDYDSESSVDSDHEPKSKNTKKWDSLLNRVLNSESGLLITTYEQLRLQGEKLLNIEWG
YAVLDEGHRIRNPNSDITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLP
VFEAEFSVPITVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTKKTEHV
LFCSLTVEQRSTYRAFLASSEVEQIFDGNRNSLYGIDVMRKICNHPDLLEREHSHQNPDY
GNPERSGKMKVVAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVK
QRMALIDEFNNSEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIG
QKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDMKDLFILKDDGD
SNASTETSNIFSQLAEEINIVGVQSDKKPESDTQLALHKTAEGSSEQTDVEMTDKTGEAM
DEETNILKSLFDAHGIHSAVNHDAIMNANDEEEKMRLEHQASQVAQRAAEALRQSRMLRS
RESISVPTWTGRSGCAGAPSSVRRRFGSTVNSRLTQTGDKPSAIKNGISAGLSSGKAPSS
AELLNRIRGSREQAIGVGLEQPQSSFPSSSGSSSRVGSLQPEVLIRKICSFVQQKGGSAD
TTSIVNHFRDIVSFNDKQLFKNLLKEIATLEKDQNRSFWVLKSEYKD
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagacgaggatcagtttttgttgagtagcttaggtgtgacatcggccaatcct
gaagatctagaacagaagatactcgatgaggcgacgaagaaaccagacaacgatgagggt
gggagtgtggaggagaagtctacacagcttgaaggaaccaatctgctttcatctagccaa
aacgagcttttgaataaattgagggctgtaaagtttgaaatagatgctgttgcatcaact
gttgagaacgtcgacgagattgcagcagaaaagggcttaaagaaagatgatgaatcagat
ttacaagggttgcatagtggttctgctcttcagcatgcccttgccacagaccggctaaga
agtcttaagaagagaaaaattcaacttgaaaaggaacttactggtcttcatggtcagagt
gcgtctagtagtgctgatcacggtaatctactgcgagatttggtgaaggagaagcctagt
cttaagagaaaattgaaagagattcggaaaccaagcagaagagatgggaagaaggtgaaa
gtagtctcctttcgtgaggacacagattttgatgctgtttttgatggagcttcagctggt
tttgttgaaacggaaagagatgaactggtgagaaaaggaattttaactccatttcacaag
ctcgatggttttgaacgccgacttcaacaacctggaccgtcaaactcacgcaacctacct
gaaggagacgacgaaaatgaggactccagcattattgatagagctgtccaatctatgtcg
ctggctgcaaaggctcgtcccacaaccaagctacttgatgcagaagacttgccaaagctt
gaaccgcccactgctccttttagaaggctgagaaagctttacaagactcctaattctccg
gataatgaagcaaagaaacgtaaagctgggaagaagagcaaaaagacgcggcctttgcct
gaaaagaaatggagaaagcgaatctctcgtgaagactctagtcttcaaggaagtggagat
ggaaggagaatcttgaccacttccagttgcgaggaagaagagctagatgattttgatgat
gcagatgacaacgaaagatcttctgtacagcttgaaggtggattaaacattcctgaatgc
atctttcgtaaactttttgactaccaaagagttggggtgcaatggctttgggaacttcat
tgccaaagggctggtggcattatcggggacgagatgggtcttggtaaaactatacaggtc
ttatcttttctcggatccttgcatttcagtaagatgtacaaaccgagtattatcatatgt
cctgttacactcttgcgtcaatggagaagagaagcacagaaatggtacccagattttcac
gtggaaatactccatgactcagcacaagattctgggcacggcaaaggtcaaggcaaggcc
tctgaaagtgattacgacagtgagagttccgttgatagtgatcatgagccaaagtctaag
aacaccaagaagtgggattctttgttaaaccgggttctaaattctgagtcagggctcctc
atcaccacatatgagcaattgaggttgcagggtgagaagctgctcaatattgagtggggt
tatgcagtactggacgaaggccatcggatccggaacccaaattctgacattactttggtg
tgcaaacagttacagaccgtccatcgaattattatgactggggcaccaatccagaataaa
ctaacagaactctggtccttgttcgattttgttttcccgggaaaactgggggtcctgcct
gtgtttgaggcagaattttctgttcccataactgtgggtggttatgccaatgcttctcct
ttacaagtgtcgactgcctataggtgtgctgttgttctccgtgatttgattatgccgtac
ctcctccgccgtatgaaggccgatgtaaacgcacatcttacaaaaaagactgaacacgtt
ctcttttgcagtctcactgtggagcagcgatctacctacagggcattccttgcaagctcc
gaagtagaacagatttttgatggcaacaggaattcgctttatgggattgatgtgatgcgt
aagatatgcaaccaccctgatctacttgagagagaacattctcaccagaacccagattat
ggaaacccagaacgcagtgggaagatgaaggttgttgcagaagtgctcaaggtctggaaa
cagcaaggacaccgtgtacttctgttttcacagactcagcaaatgcttgacatcctcgag
agcttcttggttgcaaatgagtatagttaccggaggatggatggtcttactccagtgaaa
cagagaatggctttaattgatgagtttaataattcagaagacatgtttgttttcgttctg
acgacgaaggttggtggtttgggaacaaatttgactggtgcgaacagggtcattatcttt
gacccggattggaacccctcaaatgatatgcaggcaagggaacgtgcatggcgtattggg
cagaagaaggatgttaccgtttacagattgatcactcgtggcacaattgaggagaaggta
tatcatagacagatttataaacattttctcaccaataagatcttgaagaatccacaacag
agaagattcttcaaagctcgggatatgaaagatcttttcatcctgaaagatgatggcgat
agcaacgcctccacggaaacctctaacatcttcagtcagctggcggaagagataaacatc
gtaggagttcaatcagataaaaaacctgaatccgatacacaacttgctcttcacaaaact
gcagagggatcctcagagcaaacagatgtggaaatgactgataaaactggtgaagccatg
gatgaagagacaaatatcttaaagagtctctttgatgcgcatggaatacatagtgctgtg
aatcacgacgccataatgaatgcaaacgacgaggaagagaagatgagacttgaacaccaa
gcatctcaagtggcacaaagagctgcggaagcattgcgccaatcacgaatgctgcgtagc
cgcgaaagcatctcagtgcctacatggacgggaagatctggttgtgcaggtgcaccatca
tctgtacggaggagatttggatcaactgtcaattcccggttaacccagactggagacaaa
ccatcagcgattaagaatggaatcagtgcgggtctatcttcaggcaaagcaccatcttcc
gcagagcttctcaacagaatccgcggaagcagagaacaagccattggcgttgggcttgag
cagccacagtcttcattcccttcttcttcgggttcaagcagcagagtaggttcgttgcag
cccgaggtcctgatccgaaagatatgcagctttgtacagcaaaaaggtggaagtgcagac
acgaccagcatcgtcaaccatttcagggacatagtttcttttaatgacaagcagttgttt
aagaatctcttgaaagagattgccacgcttgagaaggatcaaaatagatcgttttgggtc
ctcaaatcagagtataaagactaa
DBGET
integrated database retrieval system
