Arabidopsis thaliana (thale cress): AT2G18790
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Entry
AT2G18790 CDS
T00041
Symbol
PHYB
Name
(RefSeq) phytochrome B
KO
K12121
phytochrome B
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
AT2G18790 (PHYB)
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Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_9
PAS_4
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
816394
NCBI-ProteinID:
NP_179469
TAIR:
AT2G18790
UniProt:
P14713
A0A178W0V4
Structure
PDB
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All DBs
Position
2:8139756..8144461
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AA seq
1172 aa
AA seq
DB search
MVSGVGGSGGGRGGGRGGEEEPSSSHTPNNRRGGEQAQSSGTKSLRPRSNTESMSKAIQQ
YTVDARLHAVFEQSGESGKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCM
IAVDESSFRIIGYSENAREMLGIMPQSVPTLEKPEILAMGTDVRSLFTSSSSILLERAFV
AREITLLNPVWIHSKNTGKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVR
AISQLQALPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRDDLEPYIG
LHYPATDIPQASRFLFKQNRVRMIVDCNATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQ
YMANMGSIASLAMAVIINGNEDDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEF
LMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAA
FLYHGKYYPLGVAPSEVQIKDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMA
VAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFQAFLEVVKSRSQPWE
TAEMDAIHSLQLILRDSFKESEAAMNSKVVDGVVQPCRDMAGEQGIDELGAVAREMVRLI
ETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLIYKENEATVNKLLSRAL
RGDEEKNVEVKLKTFSPELQGKAVFVVVNACSSKDYLNNIVGVCFVGQDVTSQKIVMDKF
INIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNMAMEKLTGWSRSEVIGKMIVGEVFGS
CCMLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRNGKFVQALLTANKRVSLEGKVIGA
FCFLQIPSPELQQALAVQRRQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEATDLNE
DQKQLLETSVSCEKQISRIVGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFLLRDR
GLQLIRDIPEEIKSIEVFGDQIRIQQLLAEFLLSIIRYAPSQEWVEIHLSQLSKQMADGF
AAIRTEFRMACPGEGLPPELVRDMFHSSRWTSPEGLGLSVCRKILKLMNGEVQYIRESER
SYFLIILELPVPRKRPLSTASGSGDMMLMMPY
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggtttccggagtcgggggtagtggcggtggccgtggcggtggccgtggcggagaagaa
gaaccgtcgtcaagtcacactcctaataaccgaagaggaggagaacaagctcaatcgtcg
ggaacgaaatctctcagaccaagaagcaacactgaatcaatgagcaaagcaattcaacag
tacaccgtcgacgcaagactccacgccgttttcgaacaatccggcgaatcagggaaatca
ttcgactactcacaatcactcaaaacgacgacgtacggttcctctgtacctgagcaacag
atcacagcttatctctctcgaatccagcgaggtggttacattcagcctttcggatgtatg
atcgccgtcgatgaatccagtttccggatcatcggttacagtgaaaacgccagagaaatg
ttagggattatgcctcaatctgttcctactcttgagaaacctgagattctagctatggga
actgatgtgagatctttgttcacttcttcgagctcgattctactcgagcgtgctttcgtt
gctcgagagattaccttgttaaatccggtttggatccattccaagaatactggtaaaccg
ttttacgccattcttcataggattgatgttggtgttgttattgatttagagccagctaga
actgaagatcctgcgctttctattgctggtgctgttcaatcgcagaaactcgcggttcgt
gcgatttctcagttacaggctcttcctggtggagatattaagcttttgtgtgacactgtc
gtggaaagtgtgagggacttgactggttatgatcgtgttatggtttataagtttcatgaa
gatgagcatggagaagttgtagctgagagtaaacgagatgatttagagccttatattgga
ctgcattatcctgctactgatattcctcaagcgtcaaggttcttgtttaagcagaaccgt
gtccgaatgatagtagattgcaatgccacacctgttcttgtggtccaggacgataggcta
actcagtctatgtgcttggttggttctactcttagggctcctcatggttgtcactctcag
tatatggctaacatgggatctattgcgtctttagcaatggcggttataatcaatggaaat
gaagatgatgggagcaatgtagctagtggaagaagctcgatgaggctttggggtttggtt
gtttgccatcacacttcttctcgctgcataccgtttccgctaaggtatgcttgtgagttt
ttgatgcaggctttcggtttacagttaaacatggaattgcagttagctttgcaaatgtca
gagaaacgcgttttgagaacgcagacactgttatgtgatatgcttctgcgtgactcgcct
gctggaattgttacacagagtcccagtatcatggacttagtgaaatgtgacggtgcagca
tttctttaccacgggaagtattacccgttgggtgttgctcctagtgaagttcagataaaa
gatgttgtggagtggttgcttgcgaatcatgcggattcaaccggattaagcactgatagt
ttaggcgatgcggggtatcccggtgcagctgcgttaggggatgctgtgtgcggtatggca
gttgcatatatcacaaaaagagactttcttttttggtttcgatctcacactgcgaaagaa
atcaaatggggaggcgctaagcatcatccggaggataaagatgatgggcaacgaatgcat
cctcgttcgtcctttcaggcttttcttgaagttgttaagagccggagtcagccatgggaa
actgcggaaatggatgcgattcactcgctccagcttattctgagagactcttttaaagaa
tctgaggcggctatgaactctaaagttgtggatggtgtggttcagccatgtagggatatg
gcgggggaacaggggattgatgagttaggtgcagttgcaagagagatggttaggctcatt
gagactgcaactgttcctatattcgctgtggatgccggaggctgcatcaatggatggaac
gctaagattgcagagttgacaggtctctcagttgaagaagctatggggaagtctctggtt
tctgatttaatatacaaagagaatgaagcaactgtcaataagcttctttctcgtgctttg
agaggggacgaggaaaagaatgtggaggttaagctgaaaactttcagccccgaactacaa
gggaaagcagtttttgtggttgtgaatgcttgttccagcaaggactacttgaacaacatt
gtcggcgtttgttttgttggacaagacgttactagtcagaaaatcgtaatggataagttc
atcaacatacaaggagattacaaggctattgtacatagcccaaaccctctaatcccgcca
atttttgctgctgacgagaacacgtgctgcctggaatggaacatggcgatggaaaagctt
acgggttggtctcgcagtgaagtgattgggaaaatgattgtcggggaagtgtttgggagc
tgttgcatgctaaagggtcctgatgctttaaccaagttcatgattgtattgcataatgcg
attggtggccaagatacggataagttccctttcccattctttgaccgcaatgggaagttt
gttcaggctctattgactgcaaacaagcgggttagcctcgagggaaaggttattggggct
ttctgtttcttgcaaatcccgagccctgagctgcagcaagctttagcagtccaacggagg
caggacacagagtgtttcacgaaggcaaaagagttggcttatatttgtcaggtgataaag
aatcctttgagcggtatgcgtttcgcaaactcattgttggaggccacagacttgaacgag
gaccagaagcagttacttgaaacaagtgtttcttgcgagaaacagatctcaaggatcgtc
ggggacatggatcttgaaagcattgaagacggttcatttgtgctaaagagggaagagttt
ttccttggaagtgtcataaacgcgattgtaagtcaagcgatgttcttattaagggacaga
ggtcttcagctgatccgtgacattcccgaagagatcaaatcaatagaggtttttggagac
cagataaggattcaacagctcctggctgagtttctgctgagtataatccggtatgcacca
tctcaagagtgggtggagatccatttaagccaactttcaaagcaaatggctgatggattc
gccgccatccgcacagaattcagaatggcgtgtccaggtgaaggtctgcctccagagcta
gtccgagacatgttccatagcagcaggtggacaagccctgaaggtttaggtctaagcgta
tgtcgaaagattttaaagctaatgaacggtgaggttcaatacatccgagaatcagaacgg
tcctatttcctcatcattctggaactccctgtacctcgaaagcgaccattgtcaactgct
agtggaagtggtgacatgatgctgatgatgccatattag
DBGET
integrated database retrieval system
