Arabidopsis thaliana (thale cress): AT2G23980
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Entry
AT2G23980 CDS
T00041
Symbol
CNGC6
Name
(RefSeq) cyclic nucleotide-gated channel 6
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
AT2G23980 (CNGC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ath04040
]
AT2G23980 (CNGC6)
Ion channels [BR:
ath04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
AT2G23980 (CNGC6)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
816931
NCBI-ProteinID:
NP_001318278
TAIR:
AT2G23980
UniProt:
O82226
A0A654EWQ3
Structure
PDB
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All DBs
Position
2:complement(10201104..10205422)
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AA seq
747 aa
AA seq
DB search
MFDTCGPKGVKSQVISGQRENFVRLDSMDSRYSQSSETGLNKCTLNIQGGPKRFAQGSKA
SSGSFKKGFRKGSEGLWSIGRSIGLGVSRAVFPEDLEVSEKKIFDPQDKFLLLCNKLFVA
SCILAVSVDPLFLYLPFINDKAKCVGIDRKLAIIVTTIRTVIDSFYLFHMALRFRTAYVA
PSSRVFGRGELVIDPAQIAKRYLQQYFIIDLLSVLPVPQIIVWRFLYTSRGANVLATKQA
LRYIVLVQYIPRFLRMYPLSSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGALWYLLA
LERNNDCWSKACHNNQNCTRNFLFCGNQNMKGYAAWDNIKVSYLQLKCPVNVPEDEEPPF
DFGIYLRALSSGIVSSKNFVSKYFFCLWWGLQNLSTLGQGLETSTYPGEVIFSITLAIAG
LLLFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPPELRERVRRYDQYKWLET
RGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLFTEKSY
LVREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFCGDELLTWALDPKSGSNL
PSSTRTVKALTEVEAFALIADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFMQAA
WRRYIKRKKLEQLRKEEEEEEAAAASVIAGGSPYSIRATFLASKFAANALRSVHKNRTAK
STLLLSSTKELVKFQKPPEPDFSAEDH
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatacttgtggcccaaaaggagtcaaatctcaagtcatcagtggccaacgcgag
aactttgtgaggttagatagtatggactcaaggtactcgcaaagttccgaaacgggtcta
aacaaatgcacattgaatatacaaggaggacctaaacgttttgctcaaggaagcaaagca
tcatctggatcttttaagaaagggtttagaaaaggatcagaggggctttggtctataggt
cgatcgattggactcggtgtttcgcgcgctgtgtttccagaagatcttgaagtatcagag
aagaagatatttgatccacaagacaagtttcttttactctgcaacaagttgttcgtcgct
tcgtgtatactcgcagtatccgttgatcctctcttcttgtatcttcctttcattaatgat
aaagcgaaatgtgttggtatagatcggaaactggctattatagtaactacaataaggaca
gttatagattcgttttatctctttcatatggctctacggtttagaacagcttatgttgct
ccctcgtcacgggtttttggccgcggagagcttgttatagacccggcgcagatagctaag
cggtatctgcaacagtatttcatcattgatttactttctgttcttccggttccacagatt
atagtttggagattcctctatacttcgaggggtgcgaatgtactggcgacaaaacaagca
cttagatatatcgttttagttcagtatattccgcggtttcttcgaatgtatcctttaagt
tcagaactgaagagaactgccggggtattcgctgaaactgcgtgggcgggtgcagcgtac
tacttgttgctttacatgctcgcaagtcatattgttggggctttgtggtatttgcttgct
ttagaacgcaataacgactgttggagtaaggcttgccacaataaccagaactgtactaga
aacttcttgttttgtggtaaccaaaatatgaaaggttatgctgcttgggacaatattaaa
gtttcgtatcttcaactaaagtgccctgtcaatgtccccgaagatgaagaacctcctttt
gattttggaatctacttaagagcactctcctctggcatcgtctcgtctaagaactttgtc
tctaagtacttcttctgtttgtggtggggactacagaatcttagtacacttggtcaaggg
cttgaaaccagcacatatcctggagaggttatattctctataacacttgctattgctgga
cttctactatttgcacttctcattggaaacatgcagacttatcttcaatcgcttaccatt
cggttagaagaaatgcgagtaaaaagacgtgactcagaacagtggatgcatcatcgaatg
cttccaccagaactgcgggaacgggttagacgatatgaccagtacaagtggttggagacg
cgtggagttgatgaagagaatcttgttcagaatctcccaaaggatcttagaagagatatc
aaacgtcatctctgtctcgcgttagtccgaagagttccattgtttgagaatatggatgag
aggctgttagatgcaatctgtgagaggcttaagccatgtctgttcactgagaagtcgtac
ttggttcgtgagggagatccagtcaacgagatgctcttcattatccgtggtaggctcgaa
agtgtaaccactgatggcggtagaagcggattctacaaccggagtttacttaaagaagga
gatttctgcggtgacgagcttttgacatgggcgcttgatcccaaatccggttctaacctc
ccttcctctacaagaaccgtgaaggccttaaccgaagtggaagctttcgctctgatagcc
gatgagctgaaattcgtggcaagccagttcaggagactccatagcagacaagtacaacac
acgttcagattctattcacagcaatggaggacttgggccgcttgcttcatgcaagcagca
tggcgacggtacataaagaggaagaaattggagcaacttagaaaagaagaggaagaagaa
gaagcggcagcagcatcagttatagcaggaggaagtccttatagcataagagcaacgttc
ttggcttcaaagtttgcggcaaatgcacttcgtagcgttcacaagaaccggaccgcgaaa
tcaacattgttgttgtcatctactaaagaattggtgaaatttcagaaacctccagaacca
gatttctctgctgaagatcactga
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