Arabidopsis thaliana (thale cress): AT2G27170
Help
Entry
AT2G27170 CDS
T00041
Symbol
TTN7
Name
(RefSeq) Structural maintenance of chromosomes (SMC) family protein
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ath03036
]
AT2G27170 (TTN7)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ath00535
]
AT2G27170 (TTN7)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
AT2G27170 (TTN7)
Meiosis-specific proteins
Cohesin complex and associated proteins
AT2G27170 (TTN7)
Proteoglycans [BR:
ath00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
AT2G27170 (TTN7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
CCDC39
ATG14
AAA_29
Motif
Other DBs
NCBI-GeneID:
817259
NCBI-ProteinID:
NP_001077968
TAIR:
AT2G27170
UniProt:
Q56YN8
LinkDB
All DBs
Position
2:complement(11609073..11617496)
Genome browser
AA seq
1204 aa
AA seq
DB search
MFIKQVIIEGFKSYKEQVATEEFSNKVNCVVGANGSGKSNFFHAIRFVLSDIYQNLRSED
RHALLHEGAGHQVVSAFVEIVFDNSDNRFPVDKEEIRLRRTVGLKKDDYFLDGKHITKGE
VMNLLESAGFSRANPYYVVQQGKIASLTLMKDIERLDLLKEIGGTRVYEERRRESLRIMQ
ETGNKRKQIIEVVHYLDERLRELDEEKEELRKYQQLDKQRKSLEYTIYDKELHDAREKLE
QVEVARTKASEESTKMYDRVEKAQDDSKSLDESLKELTKELQTLYKEKETVEAQQTKALK
KKTKLELDVKDFQDRITGNIQSKNDALEQLNTVEREMQDSLRELEAIKPLYESQVDKENQ
TSKRINELEKTLSILYQKQGRATQFSNKAARDKWLRKEIEDLKRVLDSNTVQEQKLQDEI
LRLNTDLTERDEHIKKHEVEIGELESRISKSHELFNTKKRERDEEQRKRKEKWGEESQLS
SEIDKLKTELERAKKNLDHATPGDVRRGLNSIRRICADYRINGVFGPLVELVDCDEKFFT
AVEVTAGNSLFNVVVENDDISTKIIRHLNSLKGGRVTFLPLNRIKAPRVNYPKDSDAIPL
LKKLKFDSKFEPALGQVFGRTVVCRDLNVATRVAKNDDLDCITMEGDQVSRKGGMTGGFY
DHRRSKLRFMNIIMQNTKSINEKEKELEDVRRQLQVIDQQITQLVTEQQRLEADWTLCKL
QVEQLKQEIANANKQKHAIHKAIEYKEKLLGDIRTRIDQVRSSMSMKEAEMGTELVDHLT
PEEREQLSKLNPEIKDLKEKKFAYQADRIERETRKAELEANIATNLKRRITELQATIASI
DDDSLPSSAGTKEQELDDAKLSVNEAAKELKSVCDSIDEKTKQIKKIKDEKAKLKTLEDD
CKGTLQDLDKKLEELFSLRNTLLAKQDEYTKKIRGLGPLSSDAFDTYKRKNIKELQKMLH
RCSEQLQQFSHVNKKALDQYVNFTEQREELQNRQAELDAGDEKIKELITVLDQRKDESIE
RTFKGVAHHFRDVFSELVQDGYGNLIIMKKKDLDNDDEDDDDDDGGREAVTEGRVEKYIG
VKVKVSFTGQGETQLMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRTA
VGNLIRRLADDYGTQFITTTFRPELVRVADKIYGVFHKNRVSIVNVISKDQALDFIEKDQ
SHDT
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtttatcaagcaggttataatcgaaggatttaagagttacaaagagcaagttgctact
gaggagtttagcaacaaagttaattgtgttgttggggcaaatgggtctgggaaaagcaat
ttcttccatgcgattcgttttgtattgagtgacatctaccaaaatctgcgcagtgaagat
aggcatgcattactccatgaaggtgctggtcatcaagtcgtgtccgcgttcgtggagatt
gtgtttgataattctgacaaccggttcccggttgataaggaagaaatacgcttgcgcaga
acagttggcctgaagaaggatgattatttcttggatgggaaacacattacaaaaggtgaa
gttatgaatttattggagagtgctggattttctcgtgctaatccttactatgttgttcaa
caaggaaagatagcctcgttaacactaatgaaagacatagaacggttggatctgctaaaa
gagataggtggtactcgtgtttatgaggagaggcgtcgtgagagtttaagaattatgcag
gaaacaggaaataaacggaagcagatcatcgaagttgtccactacttggatgaaagacta
agagaattggacgaagagaaagaagaactcagaaaatatcaacaacttgacaaacagaga
aaatcactggaatacaccatttacgacaaagagcttcacgatgctcgggagaaactggaa
caggtagaagttgcacgaactaaggcatctgaagagtccacaaaaatgtatgatagagtg
gagaaggcccaggacgactccaagtctttagatgaatccctgaaagaactgacaaaggag
cttcagacgttatacaaggagaaagaaactgttgaagctcaacaaactaaagcgttaaag
aaaaagacaaagctggagcttgatgtgaaagactttcaggatcgaattactggaaatatt
cagtctaagaatgatgcacttgagcaacttaatacagtggaaagagaaatgcaggattct
ttgagggaactggaggcgattaagcctttgtatgaaagtcaagttgacaaggaaaaccag
acatcaaaaagaatcaatgagctggaaaaaacacttagcattctttatcagaaacaggga
cgtgcaactcaattttcaaataaggctgcccgagataaatggctcaggaaagagattgaa
gatcttaagcgtgttctagactcaaatactgttcaagagcaaaaacttcaggatgaaatt
cttcgcctcaatactgacttgacagagcgtgatgagcacatcaagaaacatgaagttgaa
attggtgaactggaatctcgtatttccaagtcccatgaactattcaatactaaaaagagg
gagagagatgaagaacaaagaaaaagaaaggaaaaatggggagaagaaagtcaactttct
tctgagattgacaagttgaaaacagaacttgaacgggcaaagaaaaaccttgatcatgca
actccaggagatgtaaggagagggctgaactctattcgacggatttgtgcagactataga
atcaatggagtttttggtccacttgttgagttggttgattgcgatgaaaagtttttcact
gcagttgaagtcactgctggaaacagcctgtttaacgtggtagttgagaatgatgatatt
tcaaccaagataattagacacctgaattctctcaagggtggacgtgtgaccttcctacct
ctgaatcggataaaggcgcctcgcgtcaactatccaaaagattctgatgcaatacctctg
ctcaaaaagttaaagttcgattcaaagtttgaaccagcattgggtcaggtttttggtaga
acagtagtatgccgtgatctgaatgtggcaacaagagttgctaagaatgatgacctcgat
tgtataactatggaaggtgaccaggtgagcagaaagggtggtatgaccggtggattctat
gaccacaggcggtcaaaattgagattcatgaatataataatgcaaaatacaaagtctata
aatgagaaggagaaggaactggaggatgttagaaggcagctgcaagtgatagatcagcag
attacacagcttgttactgagcagcagagacttgaagcagactggacgctctgcaaatta
caggtggagcaacttaagcaagagatagctaacgctaataagcagaaacatgctatacat
aaagccattgaatataaggagaaattactaggtgatattagaacacgaattgaccaggtt
agatccagcatgtctatgaaagaagctgaaatgggaacggaacttgtggatcacctaact
ccagaagaaagggagcaattgtcgaaattaaacccagaaatcaaggatcttaaggaaaaa
aaatttgcataccaggccgatcgcattgagagggagacaagaaaagcagagttggaggct
aatattgctaccaacttaaagaggagaataactgagttacaggctactatagcttccatc
gacgatgatagtttgcctagttcagctggcacaaaagaacaggaacttgatgatgcaaaa
ttgtcggtcaatgaggctgcaaaagagctcaaaagtgtctgtgacagcattgatgagaag
acaaagcaaatcaagaaaattaaagatgagaaagcaaagttaaagacattggaagatgat
tgtaaagggacactacaagatttagataaaaagttggaggaactgtttagccttcgcaac
acgctccttgctaagcaagatgagtatactaagaagattaggggattgggtccattgtca
tctgacgcttttgacacgtataaacgaaaaaatatcaaggagctgcagaagatgctacac
cggtgcagtgaacagctgcaacaattcagccatgtcaacaagaaagcgctggatcaatat
gtgaatttcacagaacagcgagaagaacttcaaaatcggcaagcagagcttgatgcagga
gatgagaaaattaaagagctgataacagttctggatcagcggaaagacgaatctatagaa
cgtactttcaaaggggttgcacatcacttcagggatgtattctctgagcttgtgcaagat
ggatatggtaaccttatcattatgaagaaaaaggatcttgataatgatgatgaagatgat
gatgatgatgatggaggtcgtgaagctgttacagagggaagggttgagaaatacattggt
gtaaaagtgaaggtctcgttcactggtcaaggggaaacacaattaatgaaacaattgtct
ggaggccaaaagactgttgttgcactcgcgttaatctttgcaatccagcgatgtgatcct
gcaccattctatctttttgatgagattgatgcagcacttgatccacagtaccgaaccgct
gtgggaaacttgattcgtcgtcttgctgatgattatggcacgcagttcatcaccacaact
ttccgtcccgagcttgtgagagtcgcggataagatatatggagtatttcataagaacaga
gtgagtattgtgaatgttatctcaaaggatcaggcgttggacttcattgagaaagatcag
tcccacgatacctga
DBGET
integrated database retrieval system
