Arabidopsis thaliana (thale cress): AT2G27880
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Entry
AT2G27880 CDS
T00041
Symbol
AGO5
Name
(RefSeq) Argonaute family protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT2G27880 (AGO5)
03036 Chromosome and associated proteins [BR:
ath03036
]
AT2G27880 (AGO5)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
AT2G27880 (AGO5)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
AT2G27880 (AGO5)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
AT2G27880 (AGO5)
microRNA pathway
RISC loading complex
AT2G27880 (AGO5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
817334
NCBI-ProteinID:
NP_850110
TAIR:
AT2G27880
UniProt:
Q9SJK3
Structure
PDB
PDBj
LinkDB
All DBs
Position
2:11871378..11876989
Genome browser
AA seq
997 aa
AA seq
DB search
MSNRGGGGHGGASRGRGGGRRSDQRQDQSSGQVAWPGLQQSYGGRGGSVSAGRGRGNVGR
GENTGDLTATQVPVASAVSGGRGRGNIGDPTFSVASSSKTVSVASSSKEESKNTEVSETM
SNLQITSTETKPEMTSLPPASSKAVTFPVRPGRGTLGKKVMVRANHFLVQVADRDLYHYD
VSINPEVISKTVNRNVMKLLVKNYKDSHLGGKSPAYDGRKSLYTAGPLPFDSKEFVVNLA
EKRADGSSGKDRPFKVAVKNVTSTDLYQLQQFLDRKQREAPYDTIQVLDVVLRDKPSNDY
VSVGRSFFHTSLGKDARDGRGELGDGIEYWRGYFQSLRLTQMGLSLNIDVSARSFYEPIV
VTDFISKFLNIRDLNRPLRDSDRLKVKKVLRTLKVKLLHWNGTKSAKISGISSLPIRELR
FTLEDKSEKTVVQYFAEKYNYRVKYQALPAIQTGSDTRPVYLPMELCQIDEGQRYTKRLN
EKQVTALLKATCQRPPDRENSIKNLVVKNNYNDDLSKEFGMSVTTQLASIEARVLPPPML
KYHDSGKEKMVNPRLGQWNMIDKKMVNGAKVTSWTCVSFSTRIDRGLPQEFCKQLIGMCV
SKGMEFKPQPAIPFISCPPEHIEEALLDIHKRAPGLQLLIVILPDVTGSYGKIKRICETE
LGIVSQCCQPRQVNKLNKQYMENVALKINVKTGGRNTVLNDAIRRNIPLITDRPTIIMGA
DVTHPQPGEDSSPSIAAVVASMDWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVH
SGLIREHFIAFRRATGQIPQRIIFYRDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRV
TFVIVQKRHHTRLFPEQHGNRDMTDKSGNIQPGTVVDTKICHPNEFDFYLNSHAGIQGTS
RPAHYHVLLDENGFTADQLQMLTNNLCYTYARCTKSVSIVPPAYYAHLAAFRARYYMESE
MSDGGSSRSRSSTTGVGQVISQLPAIKDNVKEVMFYC
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcgtggtggtggtggtcacggcggcgctagtcgtggtcgaggaggtggacga
aggtctgaccagagacaagatcagtcttctggtcaagttgcttggccgggtttacaacaa
agctacggtggtcgtggtggttctgtttccgccggtagaggtcgtggaaacgtcggaaga
ggtgaaaatactggagatctgacggcgacgcaagttccggttgcttctgctgtttctggc
gggagaggtcgtggtaacatcggagatccgacgttttctgttgcgtcttcgtctaagacg
gtgtctgttgcttcttcatctaaagaggaaagtaagaatacggaggtttctgagaccatg
tcgaaccttcagattacttcgacggagacgaaacctgaaatgacgtcacttcctccggcg
tcatctaaagcggttacgtttccggtacggccaggacgtggtactttggggaagaaagtc
atggttcgtgcgaatcatttccttgttcaagttgctgatcgtgatctctaccattacgat
gtttcgatcaatcctgaggttatatcaaagacagtgaacagaaacgtgatgaaacttctg
gttaagaattataaagactctcacttgggagggaagtcaccagcgtatgatggaaggaaa
agcctctatactgctggtccattaccttttgactcgaaagagtttgttgtgaatctggcg
gagaaaagagctgacggttcctctgggaaggacagaccgtttaaagttgctgtaaagaat
gtgacaagcactgatctttatcagttgcaacagttccttgatcgtaagcaaagagaggct
ccatatgatactatccaagtgcttgatgttgttcttagggataagccctctaatgattat
gtctctgttgggaggtcttttttccacactagtttgggaaaggacgcaagagatggtagg
ggtgagcttggagatggtattgagtactggagaggttatttccaaagtctaaggctgact
cagatgggtttgtctctgaacattgacgtttcagcaagatcattttatgaaccgattgtt
gtcactgactttattagcaagtttctgaatataagggacttaaacaggccacttagagac
tcagatcgacttaaggtgaagaaagttttgaggacactgaaagttaagttgcttcactgg
aacggcacaaaaagtgccaaaattagtgggatttctagtctacccatcagggagctaagg
ttcactctggaggacaaatcagagaagacggttgttcaatattttgctgaaaaatataat
tatagagtgaaataccaggctctacctgctattcaaacagggagtgacacaagacccgtc
tacctaccaatggagctctgccaaattgacgaagggcaaagatacaccaaaaggctcaat
gagaagcaagtgactgcattgctaaaagctacctgccaacgaccccctgatagagagaac
tcgatcaaaaacttggttgtgaaaaataattacaatgatgatctgagcaaggagtttggg
atgtcagtgactacccaactagcctcgattgaagctcgtgtacttcccccaccgatgttg
aagtaccatgacagtggtaaagagaaaatggtaaatccaaggctaggacagtggaacatg
attgacaagaaaatggttaatggagcaaaagtcacttcttggacttgcgtaagtttctct
actcggattgaccgtggtttaccccaagagttctgcaaacagttgattgggatgtgtgtc
agcaaaggaatggaatttaagcctcaacctgctattccgttcatctcttgtccccctgaa
catattgaggaagctcttctcgatatccacaaaagggcacctggtctccaactgttgatt
gtaatattgcctgatgtgactggatcatatggaaaaataaaaaggatctgtgaaacagaa
ttggggattgtctctcagtgttgccaacctagacaagttaataaactcaacaagcagtac
atggaaaatgttgccttgaagatcaatgtcaagactgggggaaggaacactgttcttaat
gatgctattagaagaaacatacctcttattactgatcgtccaaccatcatcatgggtgct
gatgtgactcacccacagcctggagaggactcaagtccttctattgctgctgttgtggcc
tctatggactggcctgagataaacaaataccgaggattggtttctgctcaagctcatagg
gaagaaattattcaggacctgtataagctggttcaggatccacaacgtgggctagtccac
tctggtttgataagggaacatttcatagcattcaggagagctacaggccagatacctcaa
aggatcatcttctatcgtgacggagtaagcgaagggcagtttagtcaggttctgctacat
gagatgactgctatccgcaaggcttgtaactctctccaagagaattatgttcctcgtgtt
actttcgtgattgtccagaaacgtcaccacacacgtttgttccctgagcaacacgggaat
cgtgatatgactgataagagtggcaatattcaaccaggtactgtcgtggacactaaaatc
tgtcaccctaatgaattcgacttctatttgaacagccatgctggtattcagggaacaagc
aggccggcacattaccatgtacttctcgatgagaacggtttcaccgctgatcagttgcaa
atgctcacaaacaacctctgctacacgtatgcgaggtgtacaaaatctgtgtcaattgtg
ccaccagcctactacgctcacttggctgcattccgtgcccgctactacatggagagtgag
atgtctgatggaggttcgagcaggtccaggagctcaacaacaggtgtgggtcaagtcatt
tcgcagctcccagcaataaaagataacgtcaaggaggttatgttttattgctaa
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integrated database retrieval system
