Arabidopsis thaliana (thale cress): AT2G28000
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Entry
AT2G28000 CDS
T00041
Symbol
CPN60A
Name
(RefSeq) chaperonin-60alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT2G28000 (CPN60A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT2G28000 (CPN60A)
03110 Chaperones and folding catalysts [BR:
ath03110
]
AT2G28000 (CPN60A)
03029 Mitochondrial biogenesis [BR:
ath03029
]
AT2G28000 (CPN60A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ath04147
]
AT2G28000 (CPN60A)
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AT2G28000 (CPN60A)
Messenger RNA biogenesis [BR:
ath03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AT2G28000 (CPN60A)
Chaperones and folding catalysts [BR:
ath03110
]
Heat shock proteins
HSP60 / Chaperonin
AT2G28000 (CPN60A)
Mitochondrial biogenesis [BR:
ath03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AT2G28000 (CPN60A)
Exosome [BR:
ath04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AT2G28000 (CPN60A)
Exosomal proteins of other body fluids (saliva and urine)
AT2G28000 (CPN60A)
Exosomal proteins of breast cancer cells
AT2G28000 (CPN60A)
Exosomal proteins of colorectal cancer cells
AT2G28000 (CPN60A)
Exosomal proteins of bladder cancer cells
AT2G28000 (CPN60A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Ribosomal_L29
Motif
Other DBs
NCBI-GeneID:
817344
NCBI-ProteinID:
NP_180367
TAIR:
AT2G28000
UniProt:
P21238
A0A178VZW6
LinkDB
All DBs
Position
2:11926446..11929488
Genome browser
AA seq
586 aa
AA seq
DB search
MASANALSSASVLCSSRQSKLGGGNQQQGQRVSYNKRTIRRFSVRANVKEIAFDQHSRAA
LQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPNAMENAGAALIRE
VASKTNDSAGDGTTTASILAREIIKHGLLSVTSGANPVSLKRGIDKTVQGLIEELQKKAR
PVKGRDDIRAVASISAGNDDLIGSMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEID
RGYISPQFVTNPEKLLAEFENARVLITDQKITAIKDIIPILEKTTQLRAPLLIIAEDVTG
EALATLVVNKLRGVLNVVAVKAPGFGERRKAMLQDIAILTGAEYLAMDMSLLVENATIDQ
LGIARKVTISKDSTTLIADAASKDELQARIAQLKKELFETDSVYDSEKLAERIAKLSGGV
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTVIPAIKETFEDA
DERLGADIVQKALLSPAALIAQNAGVEGEVVVEKIMFSDWENGYNAMTDTYENLFEAGVI
DPAKVTRCALQNAASVAGMVLTTQAIVVDKPKPKAPAAAAPEGLMV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcaaacgctctctcttccgcctccgtcctctgttcttcccgtcagagtaag
ttgggaggaggaaatcagcagcaaggtcagagagttagctacaacaagaggacaatcaga
cgttttagtgttagagctaatgtaaaggaaatagcttttgaccagcactctagagctgct
ctacaagctggtattgataagcttgctgattgtgttggtctcactcttggccctagaggg
aggaatgttgtgttggatgaatttggaagtcctaaggttgtgaatgatggagtcaccatt
gctagagctattgagttacctaatgccatggaaaatgctggtgcagcgcttattcgtgag
gttgcgagtaagactaatgactctgctggtgatgggacaaccactgcgtctatccttgct
cgggagataatcaaacatggattgttgagcgtcacttctggtgcgaatcccgtttcactc
aagaggggaattgataagactgttcaaggtctgatcgaagagcttcagaagaaagctagg
cccgtgaaaggtcgtgatgacatcagagctgtggcttctatctctgctggaaatgatgac
cttatagggtcaatgattgctgatgccatcgacaaagttggacctgatggtgttttgtcc
attgaatcttcatcttcttttgagaccacggtcgaagttgaagaagggatggagattgac
agaggttacatctcgcctcagtttgttacaaaccctgagaaactactagctgagtttgag
aatgctagggtattgatcactgatcagaagatcactgcgatcaaagacatcatccctatt
ttggagaagaccactcagcttcgtgctccgttgttgattattgcagaggatgttactggt
gaagccttagctacccttgtcgtgaacaagcttcgtggtgtcctcaatgttgttgccgtt
aaagcgccaggatttggagaaagaagaaaagccatgcttcaagatattgcaatcttgaca
ggagctgagtacctagccatggacatgagcttactggttgaaaacgcaaccatagatcaa
ttgggtattgcccgaaaagtcacgattagcaaagattcgactaccctcattgcagatgca
gcttccaaggacgaattacaagctcggattgctcagctgaagaaagaactattcgagact
gattctgtgtatgactcagagaagctcgctgagagaattgcgaagctatctggaggtgtt
gctgtcattaaagtcggagcagcaactgaaactgagcttgaggaccgtaagcttcgtatc
gaggatgcaaagaacgcaacatttgctgctatcgaggaaggcatagttccaggtggtggt
gctgctttggtgcatctctccactgttattcccgccattaaggagacttttgaggatgct
gatgaacgtttgggagctgacatagtacaaaaggcattgctgtcaccagctgctcttatt
gctcagaacgctggagttgaaggagaagttgttgtggaaaagattatgttcagcgattgg
gagaatgggtacaacgcaatgactgatacatatgagaatctgttcgaagctggagtgatt
gatccggctaaagtgacaagatgtgcgctacagaacgctgcttccgtagcaggaatggta
ctgaccactcaggccattgttgttgacaaaccgaaacccaaggctcctgctgctgctgct
cctgagggtctcatggtgtaa
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