Arabidopsis thaliana (thale cress): AT2G28830
Help
Entry
AT2G28830 CDS
T00041
Symbol
PUB12
Name
(RefSeq) armadillo/beta-catenin repeat protein
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
AT2G28830 (PUB12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT2G28830 (PUB12)
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT2G28830 (PUB12)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
U-box type E3
AT2G28830 (PUB12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
zf-RING_UBOX
Neurochondrin
zf-Nse
zf-C3HC4_4
KAP
zf-C3HC4
HTH_Tnp_IS1
Arm_2
Motif
Other DBs
NCBI-GeneID:
817432
NCBI-ProteinID:
NP_001318308
TAIR:
AT2G28830
UniProt:
Q9ZV31
LinkDB
All DBs
Position
2:complement(12368220..12370420)
Genome browser
AA seq
582 aa
AA seq
DB search
MLRICFLSLAMLAKFTWCVLERDQVMVKFQKVTSLLEQALSIIPYENLEISDELKEQVEL
VLVQLRRSLGKRGGDVYDDELYKDVLSLYSGRGSVMESDMVRRVAEKLQLMTITDLTQES
LALLDMVSSSGGDDPGESFEKMSMVLKKIKDFVQTYNPNLDDAPLRLKSSLPKSRDDDRD
MLIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPN
YVLRSLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPEDR
RSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENK
GKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGAAGAIPPLVTLLSE
GSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSH
PDGKSEVGAADAVPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQHLIEAQKLGIMDLLIE
MAENGTDRGKRKAAQLLNRFSRFNDQQKQHSGLGLEDQISLI
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgctaaggatttgctttctttcgttagccatgttagcaaaatttacctggtgtgtgttg
gagagagatcaagtgatggtgaaatttcagaaagtgacttctctattggaacaagcttta
agtataatcccttatgagaatctggaaatttcagatgaacttaaagaacaggtggagctt
gttttagttcagttaagaagatcgttaggaaaacgcggtggcgatgtgtatgatgatgag
ttgtataaggatgttctatctctttatagtggtagaggtagtgtaatggagtctgatatg
gttaggagagtggcggagaagcttcagttgatgactataactgaccttacgcaagagtca
ttggctttacttgacatggttagttctagtggtggtgatgatcctggtgaaagttttgag
aagatgtctatggttcttaagaagattaaggactttgtgcaaacttataatcctaacttg
gatgatgctccattgagactgaaatcatcgcttccgaagtcgcgagatgatgatcgagat
atgctaattccgcctgaagagttccgttgtccaatatctctagaattgatgactgatcca
gttattgtttcttcagggcagacttatgaacgtgagtgcattaagaagtggcttgaagga
ggacacttgacgtgtccaaagacgcaagaaacgctgacaagcgatatcatgacaccaaac
tatgttctaagaagccttatagctcaatggtgtgagtccaatggcatcgaacctccaaag
cgtcccaacatatctcaaccgagtagtaaggcctcatcttcgtcgtcagcccctgatgat
gaacataacaagattgaagaacttctacttaagctcacatcgcaacagcctgaagaccga
agatctgctgcaggagaaatccgtcttctagcaaaacaaaacaatcataaccgagtcgcc
attgctgcctcaggcgcgatccctcttctggtgaatctcctcacgatatctaatgactct
cggactcaagaacacgctgtgacatcgattcttaacctctcgatatgtcaagagaacaaa
gggaagattgtttattcatctggagcagttccaggtattgttcatgtgcttcagaaaggt
agcatggaagctagagaaaacgcagcagctacacttttcagcctctcggttatagacgag
aacaaagtgacaataggtgccgcaggagcgatcccgcctcttgtgaccttgctgagcgaa
ggatcacagagaggcaaaaaagacgcggcaactgctctgtttaatctctgcatatttcaa
ggaaacaaaggaaaagctgtgagagccggtttagttcccgtgctaatgaggttactaaca
gaacccgaaagcggaatggttgatgaatcactctcgatattagccatactatcgagtcat
ccggacgggaaatcagaggttggagccgctgatgcagttccagttctggtagattttata
agaagcgggtcaccgcggaacaaagaaaactcagctgcggtattagtgcacttgtgttca
tggaatcagcaacatttgattgaagctcagaaattagggattatggatcttttaatagaa
atggctgagaatggtactgacagaggaaaacgcaaagcggcacagttacttaaccgcttt
agccgttttaacgaccagcagaaacaacactctggtttaggtttggaagatcaaatctcc
ctaatctga
DBGET
integrated database retrieval system
